Gene: AT1G02730 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT1G02730
- Transcript Identifier
- AT1G02730.1
- Gene Type
- Coding gene
- Location
- 1 : 594697-598473 : negative
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description
-
cellulose synthase-like D5
- Curated Summary
-
Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.
Identifiers
Identifier | Name |
---|---|
alias | SOS6 |
alias | CSLD5 |
alias | CELLULOSE SYNTHASE LIKE D5 |
alias | SALT OVERLY SENSITIVE 6 |
alias | cellulose synthase-like D5 |
alias | ATCSLD5 |
uniprot | Q9SRW9 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0000271 | ISS | Gene Ontology | polysaccharide biosynthetic process | 1 |
GO:0009832 | ISS | Gene Ontology | plant-type cell wall biogenesis | 1 |
GO:0042546 | NAS | UniProt | cell wall biogenesis | 1 2 3 4 |
GO:0048367 | IMP | UniProt | shoot system development | 1 2 3 4 |
GO:0006970 | IMP | Gene Ontology | response to osmotic stress | 1 |
GO:0009414 | IMP | UniProt | response to water deprivation | 1 2 3 4 |
GO:0009651 | IMP | UniProt | response to salt stress | 1 2 3 4 |
GO:0000226 | RCA | Gene Ontology | microtubule cytoskeleton organization | 1 |
GO:0000724 | RCA | Gene Ontology | double-strand break repair via homologous recombination | 1 |
GO:0000911 | RCA | Gene Ontology | cytokinesis by cell plate formation | 1 |
GO:0009965 | RCA | Gene Ontology | leaf morphogenesis | 1 |
GO:0010583 | RCA | Gene Ontology | response to cyclopentenone | 1 |
GO:0042127 | RCA | Gene Ontology | regulation of cell proliferation | 1 |
GO:0030244 | IEA | UniProt | cellulose biosynthetic process | 1 2 3 |
GO:0071669 | ISO | PLAZA Integrative Orthology | plant-type cell wall organization or biogenesis | OS12G36890 |
GO:0051274 | IEA | PLAZA Homology | beta-glucan biosynthetic process | HOM03M000097 |
GO:0051273 | IEA | PLAZA Homology | beta-glucan metabolic process | HOM03M000097 |
GO:0044264 | IEA | PLAZA Homology | cellular polysaccharide metabolic process | HOM03M000097 |
GO:1901576 | IEA | PLAZA Homology | organic substance biosynthetic process | HOM03M000097 |
GO:0044262 | IEA | PLAZA Homology | cellular carbohydrate metabolic process | HOM03M000097 |
GO:0044260 | IEA | PLAZA Homology | cellular macromolecule metabolic process | HOM03M000097 |
GO:0044763 | IEA | PLAZA Homology | single-organism cellular process | HOM03M000097 |
GO:0006073 | IEA | PLAZA Homology | cellular glucan metabolic process | HOM03M000097 |
GO:0016051 | IEA | PLAZA Homology | carbohydrate biosynthetic process | HOM03M000097 |
GO:0044710 | IEA | PLAZA Homology | single-organism metabolic process | HOM03M000097 |
GO:0044711 | IEA | PLAZA Homology | single-organism biosynthetic process | HOM03M000097 |
GO:0034645 | IEA | PLAZA Homology | cellular macromolecule biosynthetic process | HOM03M000097 |
GO:0033692 | IEA | PLAZA Homology | cellular polysaccharide biosynthetic process | HOM03M000097 |
GO:0043170 | IEA | PLAZA Homology | macromolecule metabolic process | HOM03M000097 |
GO:0005976 | IEA | PLAZA Homology | polysaccharide metabolic process | HOM03M000097 |
GO:0009058 | IEA | PLAZA Homology | biosynthetic process | HOM03M000097 |
GO:0005975 | IEA | PLAZA Homology | carbohydrate metabolic process | HOM03M000097 |
GO:0009059 | IEA | PLAZA Homology | macromolecule biosynthetic process | HOM03M000097 |
GO:0044699 | IEA | PLAZA Homology | single-organism process | HOM03M000097 |
GO:0044723 | IEA | PLAZA Homology | single-organism carbohydrate metabolic process | HOM03M000097 |
GO:0034637 | IEA | PLAZA Homology | cellular carbohydrate biosynthetic process | HOM03M000097 |
GO:0009250 | IEA | PLAZA Homology | glucan biosynthetic process | HOM03M000097 |
GO:0044249 | IEA | PLAZA Homology | cellular biosynthetic process | HOM03M000097 |
GO:0030243 | IEA | PLAZA Homology | cellulose metabolic process | HOM03M000097 |
GO:0044042 | IEA | PLAZA Homology | glucan metabolic process | HOM03M000097 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0046527 | NAS | UniProt | glucosyltransferase activity | 1 2 3 4 |
GO:0051753 | IDA | UniProt | mannan synthase activity | 1 2 3 4 |
GO:0016760 | IEA | UniProt | cellulose synthase (UDP-forming) activity | 1 2 3 |
GO:0016759 | IEA | PLAZA Homology | cellulose synthase activity | HOM03M000097 |
GO:0016758 | IEA | PLAZA Homology | transferase activity, transferring hexosyl groups | HOM03M000097 |
GO:0016757 | IEA | PLAZA Homology | transferase activity, transferring glycosyl groups | HOM03M000097 |
GO:0008194 | IEA | PLAZA Homology | UDP-glycosyltransferase activity | HOM03M000097 |
GO:0035251 | IEA | PLAZA Homology | UDP-glucosyltransferase activity | HOM03M000097 |
GO:0016740 | IEA | PLAZA Homology | transferase activity | HOM03M000097 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005794 | IDA, ISM, | UniProt | Golgi apparatus | 1 2 3 4 5 |
GO:0000139 | IEA | UniProt | Golgi membrane | 1 2 3 |
GO:0016021 | IEA | UniProt | integral to membrane | 1 2 3 |
GO:0016020 | IEA | InterPro | membrane |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
10.2.1 | cell wall.cellulose synthesis.cellulose synthase |
No SignalP domains detected for this gene.