PLAZA 3.0 Monocots gene overview : AT1G01220

Gene: AT1G01220 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G01220
Transcript Identifier: AT1G01220.1
Gene Type: Coding gene
Location: 1 : 91750-95552 : positive

Family

Gene family: HOM03M001829
(44 genes in 16 species)
specific family

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Descriptions

Description: L-fucokinase/GDP-L-fucose pyrophosphorylase

Curated Summary: Encodes a bifunctional enzyme that has both L-fucokinase and GDP-L-fucose pyrophosphorylase activities. It catalyzes the two steps of the L-fucose salvage pathway for the generation of activated GDP-L-fucose. This pathway seems to be of minor importance for cell wall polysaccharide biosynthesis compared to the de novo GDP-L-fucose biosynthesis pathway in Arabidopsis.

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Identifiers

Identifier	Name
alias	FKGP
alias	Arabidopsis thaliana L-fucokinase/GDP-L-fucose pyrophosphorylase
alias	AtFKGP
alias	L-fucokinase/GDP-L-fucose pyrophosphorylase
uniprot	Q9LNJ9

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0042352	IDA	UniProt	GDP-L-fucose salvage	1 2 3
GO:0030244	RCA	Gene Ontology	cellulose biosynthetic process	1
GO:0048193	RCA	Gene Ontology	Golgi vesicle transport	1
GO:0005975	IEA	UniProt	carbohydrate metabolic process	1 2
GO:0008152	IEA	InterPro	metabolic process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004335	ISS	Gene Ontology	galactokinase activity	1
GO:0005524	IEA, ISS	UniProt	ATP binding	1 2 3
GO:0047341	IDA	UniProt	fucose-1-phosphate guanylyltransferase activity	1 2 3
GO:0050201	IDA	UniProt	fucokinase activity	1 2 3
GO:0046872	IEA	UniProt	metal ion binding	1 2
GO:0016301	IEA	InterPro	kinase activity
GO:0016773	IEA	InterPro	phosphotransferase activity, alcohol group as acceptor
GO:0016772	IEA	InterPro	transferase activity, transferring phosphorus-containing groups
GO:0003723	IEA	PLAZA Homology	RNA binding	HOM03M001829

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	IEA, ISM	UniProt	cytoplasm	1 2 3

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
IPR006206	Mevalonate/galactokinase
IPR006204	GHMP kinase N-terminal domain
IPR013750	GHMP kinase, C-terminal domain
IPR020568	Ribosomal protein S5 domain 2-type fold
IPR012887	L-fucokinase

Mapman id	Description
10.1.1.2	cell wall.precursor synthesis.NDP sugar pyrophosphorylase.GDP fucose and fucokinase

No SignalP domains detected for this gene.