Gene: AT1G01060 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G01060
Transcript Identifier
AT1G01060.1
Gene Type
Coding gene
Location
1 : 33992-37061 : negative

Family

Gene family
HOM03M000510
(126 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Homeodomain-like superfamily protein
Curated Summary
LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1
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Identifiers

Identifier Name
aliasLATE ELONGATED HYPOCOTYL 1
aliasLHY
aliasLHY1
aliasLATE ELONGATED HYPOCOTYL
uniprotQ6R0H1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355RCA, TASGene Ontologyregulation of transcription, DNA-dependent1 2
GO:0009651IEP, RCA, UniProtresponse to salt stress1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009723IEP, RCA, UniProtresponse to ethylene1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009733IEP, RCA, UniProtresponse to auxin1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009737IEP, RCA, UniProtresponse to abscisic acid1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009739IEP, RCA, UniProtresponse to gibberellin stimulus1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009751IEP, RCA, UniProtresponse to salicylic acid1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009753IEP, RCA, UniProtresponse to jasmonic acid1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0046686IEPUniProtresponse to cadmium ion1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0048574IGI, RCA, UniProtlong-day photoperiodism, flowering1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0042752IMP, RCAGene Ontologyregulation of circadian rhythm1 2
GO:0043433IMPUniProtnegative regulation of sequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0007623IGI, RCA, UniProtcircadian rhythm1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009409IGIUniProtresponse to cold1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0042754IMPUniProtnegative regulation of circadian rhythm1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0009639RCAGene Ontologyresponse to red or far red light1
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8 9 10 11 12

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677ISS, IEAGene OntologyDNA binding1
GO:0003700IDA, ISS, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0044212IDAUniProttranscription regulatory region DNA binding1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0003682IEAUniProtchromatin binding1 2 3 4 5 6 7 8 9 10 11 12

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5 6 7 8 9 10 11 12 13

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009057Homeodomain-like
IPR017930Myb domain
IPR001005SANT/Myb domain
IPR006447Myb domain, plants

Mapman id Description
27.3.26RNA.regulation of transcription.MYB-related transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBMYB-related
PlantTFDBMYB_related