Anchorpoints

Gene id
SL01G111540
Organism
Solanum lycopersicum

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL10G055470Beta-galactosidase (AHRD V1 **** B2LYJ4_PETHY)%3B contains Interpro domain(s) IPR001944 Glycoside hydrolase%2C family 35ch10-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G35010beta-galactosidase 11 (BGAL11); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 35 protein (TAIR:AT2G16730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). putative beta-galactosidase (BGAL11 gene) beta-galactosidase 114-View
AT4G38590putative beta-galactosidase (BGAL14 gene) beta-galactosidase 14 beta-galactosidase 14 (BGAL14); FUNCTIONS IN: sugar binding, cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: nuclear mRNA splicing, via spliceosome, carbohydrate metabolic process; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), PRP1 splicing factor, N-terminal (InterPro:IPR010491), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 35 protein (TAIR:AT2G16730.1); Has 3072 Blast hits to 2969 proteins in 587 species: Archae - 15; Bacteria - 892; Metazoa - 685; Fungi - 433; Plants - 695; Viruses - 19; Other Eukaryotes - 333 (source: NCBI BLink).4+View
AT2G16730glycosyl hydrolase family 35 protein glycosyl hydrolase family 35 protein; FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 11 (TAIR:AT4G35010.1); Has 2592 Blast hits to 2188 proteins in 502 species: Archae - 15; Bacteria - 1202; Metazoa - 413; Fungi - 220; Plants - 636; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). putative beta-galactosidase (BGAL13 gene)2-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD4G36517No description available.Bd4+View
BD2G24670No description available.Bd2+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00037G01380No description available.supercontig_37+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA01G27550CC_gene:BGAL1,CC_gene:BGAL6,CC_gene:BGAL16,CC_gene:BGAL14,CC_gene:BGAL11,CC_gene:Os09g0539200,CC_gene:BGAL13,CC_gene:Os08g0549200,CC_functional_completeness:complete,PRODUCT:Beta-galactosidase 11,GO:0043169,GO:0005975,GO:0005529,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.2.1.23chr1-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS08G43570Beta-galactosidase 11 beta-galactosidase precursor, putative, expressed8+View
OS09G36810Beta-galactosidase 12 beta-galactosidase precursor, putative, expressed9+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_08G42260No description available.Chr08+View
OSINDICA_09G29090No description available.Chr09+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G17480No description available.Chr04-View
PT09G13440No description available.Chr09-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB07G024870No description available.chr_7-View
SB02G031260No description available.chr_2+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI002G29680No description available.scaffold_2+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G04780name=GSVIVG01024031001;chr3-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G31220No description available.7-View


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Gene id
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Description
Chromosome
Strand