Anchorpoints

Gene id
PT04G04770
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT11G05710No description available.Chr11+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G28380MAC/Perforin domain-containing protein necrotic spotted lesions 1 (NSL1); CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 203 Blast hits to 202 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). This gene is predicted to encode a protein involved in negatively regulating salicylic acid-related defense responses and cell death programs. nsl1 mutants develop necrotic lesions spontaneously and show other features of a defense response, such as higher levels of SA and disease resistance-related transcripts, in the absence of a biotic stimulus. The NSL1 protein is predicted to have a MACPF domain, found in proteins that form a transmembrane pore in mammalian immune responses. NSL1 transcript levels do not appear to change in response to biotic stresses, but are elevated by cycloheximide in seedlings, and by sodium chloride in roots.1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00027G00130No description available.supercontig_27-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G077780Necrotic spotted lesions 1 (Fragment) (AHRD V1 *-*- B6ZA38_HELPE)%3B contains Interpro domain(s) IPR001862 Membrane attack complex component/perforin/complement C9ch02-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV10G01300name=GSVIVG01021099001;chr10+View


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Gene id
Species
Description
Chromosome
Strand