Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G22830squalene epoxidase 2 (SQE2); FUNCTIONS IN: squalene monooxygenase activity, electron carrier activity, oxidoreductase activity, FAD binding; INVOLVED IN: sterol biosynthetic process; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953); BEST Arabidopsis thaliana protein match is: squalene epoxidase 3 (TAIR:AT4G37760.1); Has 2838 Blast hits to 2834 proteins in 830 species: Archae - 46; Bacteria - 1617; Metazoa - 134; Fungi - 223; Plants - 197; Viruses - 0; Other Eukaryotes - 621 (source: NCBI BLink). squalene epoxidase 22-View
AT4G37760squalene epoxidase 3 squalene epoxidase 3 (SQE3); FUNCTIONS IN: squalene monooxygenase activity; INVOLVED IN: response to jasmonic acid stimulus, response to wounding, sterol biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953); BEST Arabidopsis thaliana protein match is: squalene epoxidase 2 (TAIR:AT2G22830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).4+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G69170No description available.Bd1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00160G00270No description available.supercontig_160-View
CP00129G00670No description available.supercontig_129-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA08G05150CC_gene:Sqle,CC_gene:SQLE,CC_gene:SQP2,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0055114,GO:0004497,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.14.99.7chr8+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G11330No description available.Chr03-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G00760No description available.Chr07+View
PT02G11450No description available.Chr02+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G042050No description available.chr_1-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G49760No description available.scaffold_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G077440Squalene monooxygenase (AHRD V1 ***- Q506K3_DATIN)%3B contains Interpro domain(s) IPR013698 Squalene epoxidasech04-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G08740name=GSVIVG01036973001;chr3-View
VV18G05490name=GSVIVG01009287001;chr18-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G08660No description available.1+View
ZM09G25330LOC1002855589-View


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Gene id
Species
Description
Chromosome
Strand