Anchorpoints

Gene id
CP00165G00430
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G04020Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent protein?protein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression. breast cancer associated RING 1 (BARD1); FUNCTIONS IN: transcription coactivator activity, DNA binding; INVOLVED IN: DNA repair, regulation of meristem structural organization, leaf development; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: breast cancer susceptibility1 (TAIR:AT4G21070.1); Has 5889 Blast hits to 5527 proteins in 313 species: Archae - 0; Bacteria - 10; Metazoa - 4435; Fungi - 374; Plants - 570; Viruses - 11; Other Eukaryotes - 489 (source: NCBI BLink). breast cancer associated RING 11+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G43300BRCA1 C Terminus domain containing protein, expressed4-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_04G35420No description available.Chr04-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G25900No description available.Chr02-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB06G022340No description available.chr_6-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI007G16980No description available.scaffold_7-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G008210Breast cancer type 1 susceptibility protein homolog (Fragment) (AHRD V1 *--- A5A751_PIG)%3B contains Interpro domain(s) IPR001357 BRCTch06-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G11370name=GSVIVG01028388001;chr7+View


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Gene id
Species
Description
Chromosome
Strand