Anchorpoints

Gene id
CP00010G00980
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G15850Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G80670.1); Has 13036 Blast hits to 6879 proteins in 476 species: Archae - 26; Bacteria - 4384; Metazoa - 3193; Fungi - 2897; Plants - 1043; Viruses - 0; Other Eukaryotes - 1493 (source: NCBI BLink). Transducin/WD40 repeat-like superfamily protein1-View
AT1G80670Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G15850.1); Has 28564 Blast hits to 16034 proteins in 648 species: Archae - 58; Bacteria - 6462; Metazoa - 9394; Fungi - 6178; Plants - 3041; Viruses - 0; Other Eukaryotes - 3431 (source: NCBI BLink). Transducin/WD40 repeat-like superfamily protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G04810No description available.Chr01+View
PT03G18000No description available.Chr03-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G08560name=GSVIVG01017573001;chr9-View


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Gene id
Species
Description
Chromosome
Strand