Anchorpoints

Gene id
AT5G60910
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G30260AGAMOUS-like 79 (AGL79); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 7337 Blast hits to 7335 proteins in 920 species: Archae - 0; Bacteria - 2; Metazoa - 637; Fungi - 301; Plants - 6322; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). AGAMOUS-like 793+View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G69890No description available.Bd1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00014G02250No description available.supercontig_14+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA04G24190CC_gene:AGL8,CC_gene:MADS15,CC_gene:SCM1,CC_gene:MADS18,CC_gene:MADS14,CC_functional_completeness:complete,PRODUCT:MADS-box transcription factor 14,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr4+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G54160OsMADS14 - MADS-box family gene with MIKCc type-box, expressed3-View
OS03G11614OsMADS1 - MADS-box family gene with MIKCc type-box, expressed MADS-box transcription factor 13-View
OS07G41370MADS-box transcription factor 18 OsMADS18 - MADS-box family gene with MIKCc type-box, expressed7+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_07G33660No description available.Chr07+View
OSINDICA_03G10160No description available.Chr03-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G09840No description available.Chr08+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G042840No description available.chr_1+View
SB02G038780No description available.chr_2+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI002G39200No description available.scaffold_2+View
SI009G50610No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G065730MADS box transcription factor (AHRD V1 ***- Q689E7_GENTR)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-boxch02-View
SL02G089200MADS-box transcription factor (AHRD V1 **** Q3KSZ0_PRUDU)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-box IPR002487 Transcription factor%2C K-boxch02+View
SL03G114830MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY)%3B contains Interpro domain(s) IPR002487 Transcription factor%2C K-boxch03-View
SL05G056620Myocyte-specific enhancer factor 2D (AHRD V1 *-*- MEF2D_HUMAN)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-box IPR002487 Transcription factor%2C K-boxch05-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G08000MADS-box transcription factor 11-View


Download

Gene id
Species
Description
Chromosome
Strand