Functional Clusters   top

Cluster information

Cluster identifier
CH_sly_96
Species
Solanum lycopersicum
Chromosome
ch02
E-value
0.000689607
Data type
MapMan
Data identifier
34
Data description
transport

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM03M00028119427613
HOM03M00018027318114
HOM03M000900796115
HOM03M000843835114
HOM03M00008056438216

Gene information

In cluster Gene id Description Gene type Gene family
V SL02G071050Purine permease family protein (AHRD V1 **-* D7MCV2_ARALY)%3B contains Interpro domain(s) IPR004853 Protein of unknown function DUF250Coding geneHOM03M000281 ORTHO03M022012
V SL02G071060Purine permease family protein (AHRD V1 **-* D7MCV2_ARALY)%3B contains Interpro domain(s) IPR004853 Protein of unknown function DUF250Coding geneHOM03M000281 ORTHO03M022012
V SL02G071070Cation/H(+) antiporter 18 (AHRD V1 **** CHX18_ARATH)%3B contains Interpro domain(s) IPR006153 Cation/H+ exchangerCoding geneHOM03M000180 orphan gene
V SL02G071080Purine permease family protein (AHRD V1 **-* D7MCV2_ARALY)%3B contains Interpro domain(s) IPR004853 Protein of unknown function DUF250Coding geneHOM03M000281 orphan gene
V SL02G071090Probable purine permeaseCoding geneHOM03M000281 orphan gene
V SL02G071100Probable purine permeaseCoding geneHOM03M000281 orphan gene
V SL02G071110Purine permease family protein (AHRD V1 **-* D7MCV2_ARALY)%3B contains Interpro domain(s) IPR004853 Protein of unknown function DUF250Coding geneHOM03M000281 orphan gene
X SL02G071120CAS1 domain containing 1 (AHRD V1 **-- B0W8N6_CULQU)%3B contains Interpro domain(s) IPR012419 Cas1p-likeCoding geneHOM03M001354 orphan gene
X SL02G071130WRKY transcription factor 71Coding geneHOM03M000024 ORTHO03M000410
V SL02G071140Potassium inward rectifier (Kir)-like channel 3Coding geneHOM03M000900 orphan gene
X SL02G071150DNA-binding protein (AHRD V1 **** B7R4T4_9EURY)%3B contains Interpro domain(s) IPR002836 DNA-binding TFAR19-related proteinCoding geneHOM03M005614 ORTHO03M003644
X SL02G071160Probable methyltransferaseCoding geneHOM03M000728 orphan gene
X SL02G071170Coatomer subunit zeta-1 (AHRD V1 ***- Q9MAZ0_MAIZE)%3B contains Interpro domain(s) IPR011012 Longin-likeCoding geneHOM03M002147 ORTHO03M003875
X SL02G071180TA9 protein (Fragment) (AHRD V1 *--- Q70KT1_ORYSJ)%3B contains Interpro domain(s) IPR009719 Protein of unknown function DUF1296Coding geneHOM03M001704 orphan gene
X SL02G071190C-terminal processing peptidase, chloroplasticCoding geneHOM03M001434 orphan gene
X SL02G071200endo-1,3-beta-glucosidase-like proteinCoding geneHOM03M000028 ORTHO03M025861
X SL02G071210413 inner membrane protein 2, chloroplasticCoding geneHOM03M005123 orphan gene
X SL02G071220Response regulator 5 (AHRD V1 ***- Q9FRZ0_MAIZE)%3B contains Interpro domain(s) IPR001789 Signal transduction response regulator%2C receiver regionCoding geneHOM03M000363 orphan gene
X SL02G071230Pre-mRNA-processing factor 39 (AHRD V1 ***- B2VZM3_PYRTR)%3B contains Interpro domain(s) IPR003107 RNA-processing protein%2C HAT helixCoding geneHOM03M001791 orphan gene
X SL02G071240Genomic DNA chromosome 5 P1 clone MPL12 (AHRD V1 *-*- Q9FL22_ARATH)Coding geneHOM03M001791 orphan gene
X SL02G071250Carboxy-terminal domain RNA polymerase II polypeptide A small phosphataseCoding geneHOM03M001115 ORTHO03M004503
X SL02G071260Phytochrome ACoding geneHOM03M001131 orphan gene
X SL02G071270RNA-binding protein (AHRD V1 *--* A8JCE7_CHLRE)%3B contains Interpro domain(s) IPR007201 RNA recognition motif 2Coding geneHOM03M000473 ORTHO03M002000
X SL02G071280Probable 16S rRNA-processing protein RimMCoding geneHOM03M006448 orphan gene
X SL02G071290No description available.Coding geneorphan geneorphan gene
X SL02G071300Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7MRE6_ARALY)%3B contains Interpro domain(s) IPR002885 Pentatricopeptide repeatCoding geneHOM03M000001 orphan gene
V SL02G071310Plasma membrane associated protein (AHRD V1 ***- B4FLA8_MAIZE)%3B contains Interpro domain(s) IPR008390 AWPM-19-likeCoding geneHOM03M000843 orphan gene
X SL02G071320No description available.Coding geneorphan geneorphan gene
X SL02G071330Sorbin and SH3 domain-containing protein 2Coding geneHOM03M000957 ORTHO03M001728
V SL02G071340Lipid A export ATP-binding/permease protein msbA (AHRD V1 *--- MSBA_SYNAS)%3B contains Interpro domain(s) IPR003439 ABC transporter-likeCoding geneHOM03M000080 ORTHO03M003863
V SL02G071350Lipid A export ATP-binding/permease protein msbA (AHRD V1 *--* MSBA_CHRVO)%3B contains Interpro domain(s) IPR003439 ABC transporter-likeCoding geneHOM03M000080 orphan gene