Functional Clusters   top

Cluster information

Cluster identifier
CH_ath_93
Species
Arabidopsis thaliana
Chromosome
2
E-value
0.000739539
Data type
MapMan
Data identifier
34
Data description
transport

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM03M00008551535316
HOM03M00008056431116
HOM03M00048213110113
HOM03M00004091345316
HOM03M004422211115
HOM03M00006963337116
HOM03M000029106553215
HOM03M000030105959116
HOM03M007356131112
HOM03M001511515113
HOM03M0004851306116
HOM03M000858814114
HOM03M000799886115
HOM03M000824855116
HOM03M0006511051115
HOM03M000704984116
HOM03M004794202115
HOM03M00005472551116

Gene information

In cluster Gene id Description Gene type Gene family
V AT2G36830gamma tonoplast intrinsic protein (GAMMA-TIP); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2 (TAIR:AT3G26520.1); Has 11016 Blast hits to 10983 proteins in 2213 species: Archae - 82; Bacteria - 5238; Metazoa - 1501; Fungi - 451; Plants - 2489; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink).Coding geneHOM03M000085 ORTHO03M002034
X AT2G36835unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03M006686 orphan gene
X AT2G36840ACT-like superfamily protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain-containing protein (TAIR:AT2G39570.1); Has 798 Blast hits to 670 proteins in 149 species: Archae - 0; Bacteria - 272; Metazoa - 0; Fungi - 7; Plants - 430; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).Coding geneHOM03M001498 orphan gene
X AT2G36850Callose synthaseCoding geneHOM03M000195 orphan gene
X AT2G36854unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).Coding geneorphan geneorphan gene
X AT2G36860tRNA-Tyr (anticodon: GTA)RNA gene
X AT2G36870Probable xyloglucan endotransglucosylase/hydrolase protein 32Coding geneHOM03M000094 orphan gene
X AT2G36880methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: copper ion binding, methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 10904 Blast hits to 10897 proteins in 2898 species: Archae - 12; Bacteria - 5503; Metazoa - 373; Fungi - 167; Plants - 705; Viruses - 1; Other Eukaryotes - 4143 (source: NCBI BLink).Coding geneHOM03M000965 orphan gene
X AT2G36881unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).Coding geneorphan geneorphan gene
X AT2G36885unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 172 Blast hits to 172 proteins in 58 species: Archae - 0; Bacteria - 116; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).Coding geneHOM03M007503 orphan gene
X AT2G36890Duplicated homeodomain-like superfamily proteinCoding geneHOM03M000013 orphan gene
X AT2G36895unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 32 Blast hits to 32 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03M006805 ORTHO03M004657
X AT2G36900membrin 11 (MEMB11); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, cellular membrane fusion; LOCATED IN: endoplasmic reticulum membrane, Golgi membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: membrin 12 (TAIR:AT5G50440.1); Has 489 Blast hits to 489 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 100; Plants - 135; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).Coding geneHOM03M004566 orphan gene
V AT2G36910Beta-(1--2)glucan export ATP-binding/permease protein NdvACoding geneHOM03M000080 orphan gene
X AT2G36916unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).Coding geneorphan geneorphan gene
X AT2G36920unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02870.1); Has 13 Blast hits to 11 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneorphan geneorphan gene
X AT2G36930finger protein 593Coding geneHOM03M004878 orphan gene
X AT2G36940unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneorphan geneorphan gene
V AT2G36950Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G03380.1); Has 2801 Blast hits to 1963 proteins in 260 species: Archae - 0; Bacteria - 269; Metazoa - 336; Fungi - 47; Plants - 1796; Viruses - 4; Other Eukaryotes - 349 (source: NCBI BLink).Coding geneHOM03M000482 orphan gene
X AT2G36960TSL-kinase interacting protein 1Coding geneHOM03M002165 ORTHO03M004489
X AT2G36970UDP-glycosyltransferase 86A2Coding geneHOM03M000007 ORTHO03M013764
X AT2G36980Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 45451 Blast hits to 13631 proteins in 250 species: Archae - 6; Bacteria - 3; Metazoa - 113; Fungi - 146; Plants - 44602; Viruses - 0; Other Eukaryotes - 581 (source: NCBI BLink).Coding geneHOM03M000001 ORTHO03M008391
X AT2G36985DVL family proteinCoding geneHOM03M000577 ORTHO03M024081
X AT2G36990RNApolymerase sigma-subunit FCoding geneHOM03M000679 ORTHO03M006329
X AT2G37000Transcription factor TCP11Coding geneHOM03M000325 ORTHO03M024082
V AT2G37010Putative white-brown complex homolog protein 30Coding geneHOM03M000040 orphan gene
X AT2G37020Translin family protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translin, C-terminal (InterPro:IPR016069), Translin (InterPro:IPR002848), Translin, N-terminal (InterPro:IPR016068).Coding geneHOM03M006688 ORTHO03M004079
X AT2G37025TRF-like 8Coding geneHOM03M001922 orphan gene
X AT2G37030SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G53250.1); Has 1122 Blast hits to 1114 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1121; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).Coding geneHOM03M000070 orphan gene
X AT2G37035unknown protein; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).Coding geneHOM03M006056 orphan gene
X AT2G37040Phenylalanine ammonia-lyaseCoding geneHOM03M000409 orphan gene
X AT2G37050Leucine-rich repeat protein kinase family proteinCoding geneHOM03M000084 orphan gene
X AT2G37060nuclear factor Y, subunit B8Coding geneHOM03M000215 orphan gene
X AT2G37070unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53320.1); Has 1323 Blast hits to 775 proteins in 176 species: Archae - 0; Bacteria - 113; Metazoa - 351; Fungi - 175; Plants - 115; Viruses - 13; Other Eukaryotes - 556 (source: NCBI BLink).Coding geneHOM03M006591 orphan gene
X AT2G37080constitutive active ROPs 2, chloroplasticCoding geneHOM03M002359 ORTHO03M011346
X AT2G37090Probable beta-1,4-xylosyltransferase IRX9Coding geneHOM03M000746 ORTHO03M002053
X AT2G37100protamine P1 family proteinCoding geneHOM03M009641 ORTHO03M011347
X AT2G37110number regulator 8Coding geneHOM03M006367 ORTHO03M008393
X AT2G37120S1FA-like DNA-binding proteinCoding geneHOM03M003920 ORTHO03M002231
X AT2G37130Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: defense response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G21960.1); Has 3882 Blast hits to 3863 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 40; Plants - 3803; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).Coding geneHOM03M000017 ORTHO03M006075
X AT2G37140Terpenoid synthases superfamily proteinCoding geneHOM03M000088 orphan gene
X AT2G37150RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1).Coding geneHOM03M000162 orphan gene
X AT2G37160Transducin/WD40 repeat-like superfamily proteinCoding geneHOM03M002814 ORTHO03M004159
V AT2G37170Aquaporin PIP2Coding geneHOM03M000085 orphan gene
V AT2G37180RESPONSIVE TO DESICCATION 28 (RD28); FUNCTIONS IN: water channel activity; INVOLVED IN: response to desiccation, response to water deprivation, transport, response to osmotic stress; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: shoot, root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2 (TAIR:AT2G37170.1); Has 10809 Blast hits to 10795 proteins in 2215 species: Archae - 81; Bacteria - 5139; Metazoa - 1474; Fungi - 455; Plants - 2518; Viruses - 2; Other Eukaryotes - 1140 (source: NCBI BLink).Coding geneHOM03M000085 orphan gene
X AT2G37190Ribosomal protein L11 family protein; FUNCTIONS IN: structural constituent of ribosome, zinc ion binding; INVOLVED IN: response to cold, ribosome biogenesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT3G53430.1); Has 1580 Blast hits to 1580 proteins in 592 species: Archae - 303; Bacteria - 410; Metazoa - 359; Fungi - 167; Plants - 131; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink).Coding geneHOM03M001241 ORTHO03M000311
X AT2G37195unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03M006586 orphan gene
X AT2G37200Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G28370.1); Has 205 Blast hits to 205 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03M000716 orphan gene
X AT2G37210riboside 5'-monophosphate phosphoribohydrolaseCoding geneHOM03M000371 orphan gene
X AT2G37220RNA-binding (RRM/RBD/RNP motifs) family proteinCoding geneHOM03M000184 orphan gene
X AT2G37230Tetratricopeptide repeat (TPR)-like superfamily proteinCoding geneHOM03M000003 orphan gene
X AT2G37240Thioredoxin-like protein AAED1, chloroplasticCoding geneHOM03M005184 ORTHO03M006330
X AT2G37250Adenylate kinaseCoding geneHOM03M001467 orphan gene
X AT2G37260WRKY family transcription factor family proteinCoding geneHOM03M000024 orphan gene
X AT2G3727040S ribosomal protein S5Coding geneHOM03M002269 orphan gene
V AT2G37280Pleiotropic ABC efflux transporter of multiple drugsCoding geneHOM03M000040 orphan gene
X AT2G37290Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT3G55020.1).Coding geneHOM03M000969 orphan gene
X AT2G37300unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages.Coding geneHOM03M005481 orphan gene
X AT2G37310Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 41005 Blast hits to 14175 proteins in 268 species: Archae - 2; Bacteria - 17; Metazoa - 83; Fungi - 122; Plants - 40263; Viruses - 0; Other Eukaryotes - 518 (source: NCBI BLink).Coding geneHOM03M000001 orphan gene
X AT2G37320Tetratricopeptide repeat (TPR)-like superfamily proteinCoding geneHOM03M000001 ORTHO03M003002
V AT2G37330Protein ALUMINUM SENSITIVE 3Coding geneHOM03M004422 orphan gene
X AT2G37340arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.2); Has 128112 Blast hits to 126672 proteins in 4377 species: Archae - 175; Bacteria - 14621; Metazoa - 47197; Fungi - 12494; Plants - 32367; Viruses - 521; Other Eukaryotes - 20737 (source: NCBI BLink).Coding geneHOM03M001567 orphan gene
V AT2G37360ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport; LOCATED IN: membrane; EXPRESSED IN: petal, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Pigment precursor permease (InterPro:IPR005284), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G53510.1); Has 392085 Blast hits to 356271 proteins in 4132 species: Archae - 6993; Bacteria - 312114; Metazoa - 8789; Fungi - 6117; Plants - 5602; Viruses - 12; Other Eukaryotes - 52458 (source: NCBI BLink).Coding geneHOM03M000040 orphan gene
X AT2G37362No description available.RNA gene
X AT2G37370unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).Coding geneHOM03M002012 orphan gene
X AT2G37380unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39370.1); Has 1284 Blast hits to 422 proteins in 114 species: Archae - 0; Bacteria - 90; Metazoa - 125; Fungi - 151; Plants - 136; Viruses - 0; Other Eukaryotes - 782 (source: NCBI BLink).Coding geneHOM03M002641 orphan gene
X AT2G37390Chloroplast-targeted copper chaperone protein; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), Copper chaperone, chloroplast-targeted, predicted (InterPro:IPR016578); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT3G53530.1); Has 1086 Blast hits to 1014 proteins in 44 species: Archae - 0; Bacteria - 10; Metazoa - 2; Fungi - 4; Plants - 1070; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03M000095 ORTHO03M005934
X AT2G37400Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G53560.1); Has 2154 Blast hits to 1804 proteins in 477 species: Archae - 203; Bacteria - 1195; Metazoa - 120; Fungi - 25; Plants - 138; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink).Coding geneHOM03M002602 orphan gene
X AT2G37410membrane translocase subunit TIM17-2Coding geneHOM03M001555 ORTHO03M001578
X AT2G37420ATP binding microtubule motor family proteinCoding geneHOM03M000033 orphan gene
X AT2G37430C2H2 and C2HC zinc fingers superfamily proteinCoding geneHOM03M000154 orphan gene
X AT2G37435Cystatin/monellin superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin (InterPro:IPR000010), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381), Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT1G63190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).Coding geneHOM03M011262 orphan gene
X AT2G37440I inositol 1,4,5-trisphosphate 5-phosphatase CVP2Coding geneHOM03M000209 ORTHO03M002341
X AT2G37450nodulin MtN21 /EamA-like transporter family proteinCoding geneHOM03M000066 orphan gene
X AT2G37460nodulin MtN21 /EamA-like transporter family proteinCoding geneHOM03M000066 orphan gene
X AT2G37470Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G53650.1); Has 3293 Blast hits to 3281 proteins in 346 species: Archae - 0; Bacteria - 0; Metazoa - 2242; Fungi - 218; Plants - 466; Viruses - 0; Other Eukaryotes - 367 (source: NCBI BLink).Coding geneHOM03M000302 orphan gene
X AT2G37478conserved peptide upstream open reading frame 52Coding geneorphan geneorphan gene
X AT2G37480unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 186 Blast hits to 186 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 14; Fungi - 7; Plants - 154; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).Coding geneHOM03M007846 ORTHO03M013092
X AT2G37500protein ArgJ, chloroplasticCoding geneHOM03M005686 orphan gene
X AT2G37510RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G54580.1); Has 146 Blast hits to 146 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).Coding geneHOM03M000068 ORTHO03M011348
X AT2G37520Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domainCoding geneHOM03M001046 orphan gene
X AT2G37530unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03M004387 ORTHO03M011349
X AT2G37540NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: pollen tube growth; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G02540.1); Has 68340 Blast hits to 68248 proteins in 3185 species: Archae - 570; Bacteria - 45342; Metazoa - 4477; Fungi - 4309; Plants - 2410; Viruses - 0; Other Eukaryotes - 11232 (source: NCBI BLink).Coding geneHOM03M000246 orphan gene
X AT2G37550Probable ADP-ribosylation factor GTPase-activating protein AGD6Coding geneHOM03M000675 orphan gene
X AT2G37555other RNARNA gene
X AT2G37560origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 366 Blast hits to 364 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 134; Plants - 46; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).Coding geneHOM03M005804 orphan gene
X AT2G37570HSP20-like chaperones superfamily proteinCoding geneHOM03M001589 ORTHO03M001863
X AT2G37580RING/U-box superfamily proteinCoding geneHOM03M000020 ORTHO03M024084
X AT2G37585Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G15050.1); Has 846 Blast hits to 846 proteins in 95 species: Archae - 0; Bacteria - 25; Metazoa - 486; Fungi - 0; Plants - 317; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).Coding geneHOM03M000238 orphan gene
X AT2G37590DNA binding with one finger 2.4 (DOF2.4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1447 Blast hits to 1391 proteins in 103 species: Archae - 4; Bacteria - 20; Metazoa - 104; Fungi - 10; Plants - 1085; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink).Coding geneHOM03M000098 ORTHO03M024085
X AT2G37600Ribosomal protein L36e family proteinCoding geneHOM03M001804 orphan gene
X AT2G37610unknown protein; Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneorphan geneorphan gene
X AT2G37620actin 1 (ACT1); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: cytoskeleton organization, root hair elongation, developmental growth; LOCATED IN: cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: ovule, vascular bundle, male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15230 Blast hits to 14806 proteins in 3046 species: Archae - 8; Bacteria - 15; Metazoa - 5741; Fungi - 5229; Plants - 1611; Viruses - 2; Other Eukaryotes - 2624 (source: NCBI BLink).Coding geneHOM03M000164 orphan gene
X AT2G37630rough sheath 2 homologCoding geneHOM03M004228 orphan gene
X AT2G37640Expansin-A3Coding geneHOM03M000050 orphan gene
X AT2G37650GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 14 (TAIR:AT1G07530.1); Has 2417 Blast hits to 2350 proteins in 288 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 2410; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).Coding geneHOM03M000051 orphan gene
X AT2G37660NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G02240.1); Has 2691 Blast hits to 2647 proteins in 745 species: Archae - 56; Bacteria - 1822; Metazoa - 3; Fungi - 41; Plants - 459; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).Coding geneHOM03M003292 ORTHO03M015954
X AT2G37670Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G02430.1); Has 38438 Blast hits to 23319 proteins in 700 species: Archae - 52; Bacteria - 5411; Metazoa - 15006; Fungi - 8500; Plants - 4706; Viruses - 3; Other Eukaryotes - 4760 (source: NCBI BLink).Coding geneHOM03M000456 orphan gene
X AT2G37678far-red elongated hypocotyl 1 (FHY1); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: maintenance of protein location in nucleus, response to red or far red light, response to far red light, photomorphogenesis; LOCATED IN: nuclear body, nucleus, cytoplasm; EXPRESSED IN: hypocotyl; BEST Arabidopsis thaliana protein match is: far-red-elongated hypocotyl1-like (TAIR:AT5G02200.2); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03M009252 orphan gene
X AT2G37680induced degradation protein 4 homologCoding geneHOM03M005026 orphan gene
X AT2G37690phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putativeCoding geneHOM03M003145 orphan gene
X AT2G37700CER1-like 2Coding geneHOM03M000542 ORTHO03M000310
X AT2G37710receptor lectin kinase (RLK); FUNCTIONS IN: kinase activity; INVOLVED IN: response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 113290 Blast hits to 111820 proteins in 4637 species: Archae - 92; Bacteria - 13273; Metazoa - 41290; Fungi - 9298; Plants - 33316; Viruses - 357; Other Eukaryotes - 15664 (source: NCBI BLink).Coding geneHOM03M000046 ORTHO03M000003
X AT2G37720TRICHOME BIREFRINGENCE-LIKE 15 (TBL15); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: leaf; EXPRESSED DURING: LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 14 (TAIR:AT5G64020.1); Has 1325 Blast hits to 1306 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1323; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03M000049 ORTHO03M018732
X AT2G37730Protein of unknown function (DUF604)Coding geneHOM03M000417 orphan gene
X AT2G37740Probable transcriptional regulator RABBIT EARSCoding geneHOM03M000478 orphan gene
X AT2G37750unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03M005065 orphan gene
X AT2G37760NAD(P)-linked oxidoreductase superfamily proteinCoding geneHOM03M000219 orphan gene
X AT2G37770NAD(P)-linked oxidoreductase superfamily proteinCoding geneHOM03M000219 orphan gene
X AT2G37780Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G37820.1); Has 2672 Blast hits to 1981 proteins in 235 species: Archae - 0; Bacteria - 73; Metazoa - 736; Fungi - 340; Plants - 1267; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink).Coding geneHOM03M014329 orphan gene
X AT2G37790NAD(P)-linked oxidoreductase superfamily proteinCoding geneHOM03M000219 ORTHO03M004480
X AT2G37800Probable nucleoredoxin 1Coding geneHOM03M000912 ORTHO03M018733
X AT2G37810Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G37800.1); Has 1776 Blast hits to 724 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 55; Fungi - 0; Plants - 1705; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).Coding geneHOM03M000912 ORTHO03M018733
X AT2G37820Probable nucleoredoxin 1-1Coding geneHOM03M000912 orphan gene
X AT2G37830pseudogene, glycine-rich proteinPseudo gene
X AT2G37840calmodulin-dependent protein kinase typeCoding geneHOM03M000021 ORTHO03M000923
X AT2G37860Protein of unknown function (DUF3411)Coding geneHOM03M001340 ORTHO03M004658
X AT2G37870Non-specific lipid-transfer protein 1Coding geneHOM03M001544 orphan gene
X AT2G37880Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT1G21050.1); Has 257 Blast hits to 256 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03M000375 orphan gene
V AT2G37890Putative calcium-binding mitochondrial carrier F55A11.4Coding geneHOM03M000069 orphan gene
V AT2G37900Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G53960.1); Has 7031 Blast hits to 6882 proteins in 1319 species: Archae - 0; Bacteria - 3384; Metazoa - 508; Fungi - 445; Plants - 2220; Viruses - 0; Other Eukaryotes - 474 (source: NCBI BLink).Coding geneHOM03M000029 orphan gene
V AT2G37910cation/hydrogen exchanger, putative (CHX21)Coding geneHOM03M000030 orphan gene
V AT2G37920copper ion transmembrane transportersCoding geneHOM03M007356 orphan gene
V AT2G37925Copper transporter 4Coding geneHOM03M001511 orphan gene
X AT2G37930Protein of unknown function (DUF3527); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, chloroplast envelope; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT5G01030.2); Has 289 Blast hits to 262 proteins in 54 species: Archae - 0; Bacteria - 9; Metazoa - 59; Fungi - 32; Plants - 123; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).Coding geneHOM03M003711 orphan gene
X AT2G37940Arabidopsis Inositol phosphorylceramide synthase 2 (AtIPCS2); BEST Arabidopsis thaliana protein match is: Arabidopsis Inositol phosphorylceramide synthase 1 (TAIR:AT3G54020.1); Has 438 Blast hits to 435 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 250; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).Coding geneHOM03M001788 orphan gene
X AT2G37950RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G05830.1); Has 598 Blast hits to 594 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 45; Fungi - 4; Plants - 538; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).Coding geneHOM03M001168 orphan gene
X AT2G37960unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54060.2); Has 418 Blast hits to 247 proteins in 92 species: Archae - 0; Bacteria - 163; Metazoa - 49; Fungi - 80; Plants - 28; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink).Coding geneHOM03M005419 ORTHO03M005637
X AT2G37970SOUL heme-binding family proteinCoding geneHOM03M002620 ORTHO03M003256
X AT2G37975early response 3-interacting protein 1Coding geneHOM03M003647 ORTHO03M005367
X AT2G37980O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G54100.1); Has 844 Blast hits to 822 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03M000102 orphan gene
X AT2G37990biogenesis regulatory protein homologCoding geneHOM03M003209 orphan gene
X AT2G38000Protein SSUH2 homologCoding geneHOM03M007058 orphan gene
X AT2G38010Neutral ceramidaseCoding geneHOM03M002936 orphan gene
X AT2G38020sorting-associated protein 16 homologCoding geneHOM03M004758 ORTHO03M004260
X AT2G38025OTU domain-containing protein At3g57810Coding geneHOM03M006571 ORTHO03M006331
X AT2G38030tRNA-Glu (anticodon: CTC)RNA gene
X AT2G38040acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit (CAC3); FUNCTIONS IN: acetyl-CoA carboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: acetyl-CoA carboxylase complex, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA carboxylase, alpha subunit, conserved region (InterPro:IPR020582), Acetyl-CoA carboxylase, alpha subunit (InterPro:IPR001095), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 39620 Blast hits to 29201 proteins in 2891 species: Archae - 603; Bacteria - 9663; Metazoa - 14634; Fungi - 2688; Plants - 1525; Viruses - 82; Other Eukaryotes - 10425 (source: NCBI BLink).Coding geneHOM03M005455 orphan gene
X AT2G38050DE-ETIOLATED 2 (DET2); FUNCTIONS IN: sterol 5-alpha reductase activity; INVOLVED IN: response to light stimulus, brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system, integral to membrane, membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), 3-oxo-5-alpha-steroid 4-dehydrogenase (InterPro:IPR016636); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT5G16010.1); Has 1601 Blast hits to 1599 proteins in 320 species: Archae - 0; Bacteria - 193; Metazoa - 442; Fungi - 195; Plants - 239; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink).Coding geneHOM03M004893 ORTHO03M004261
V AT2G38060phosphate transporter 4;2 (PHT4;2); FUNCTIONS IN: organic anion transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plastid, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;3 (TAIR:AT3G46980.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).Coding geneHOM03M000485 orphan gene
X AT2G38070Protein of unknown function (DUF740)Coding geneHOM03M001767 orphan gene
X AT2G38080Laccase-12/13Coding geneHOM03M000056 orphan gene
X AT2G38090Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G58900.1); Has 1891 Blast hits to 1883 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 3; Plants - 1444; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink).Coding geneHOM03M000100 ORTHO03M011350
V AT2G38100proton-dependent oligopeptide transport (POT) family protein; FUNCTIONS IN: amino acid transmembrane transporter activity, uracil transmembrane transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 2766 Blast hits to 2715 proteins in 326 species: Archae - 0; Bacteria - 547; Metazoa - 329; Fungi - 2; Plants - 1871; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).Coding geneHOM03M000029 ORTHO03M024087
X AT2G38110glycerol-3-phosphate acyltransferase 6Coding geneHOM03M000307 orphan gene
V AT2G38120Auxin transporter-like proteinCoding geneHOM03M000858 orphan gene
X AT2G38130ATMAK3; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G13780.1); Has 3613 Blast hits to 3609 proteins in 1331 species: Archae - 279; Bacteria - 1857; Metazoa - 641; Fungi - 294; Plants - 213; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink).Coding geneHOM03M003260 orphan gene
X AT2G38140plastid-specific ribosomal protein 4 (PSRP4); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 87 Blast hits to 87 proteins in 23 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).Coding geneHOM03M007201 orphan gene
X AT2G38150alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, Golgi stack; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 454 Blast hits to 450 proteins in 114 species: Archae - 0; Bacteria - 88; Metazoa - 237; Fungi - 18; Plants - 94; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).Coding geneHOM03M003111 ORTHO03M006332
X AT2G38152alpha 1,4-glycosyltransferase family proteinCoding geneHOM03M003111 orphan gene
X AT2G38160unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits to 731 proteins in 211 species: Archae - 0; Bacteria - 236; Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32; Other Eukaryotes - 91 (source: NCBI BLink).Coding geneHOM03M002978 orphan gene
V AT2G38170cation exchanger 1Coding geneHOM03M000799 orphan gene
X AT2G38180esterase/lipase At2g38180Coding geneHOM03M000953 orphan gene
X AT2G38185RING/U-box superfamily proteinCoding geneHOM03M002318 ORTHO03M015955
X AT2G38195RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).Coding geneHOM03M002318 orphan gene
X AT2G38210putative PDX1-like protein 4 (PDX1L4); INVOLVED IN: response to ethylene stimulus, pyridoxal phosphate biosynthetic process, response to stress; LOCATED IN: plasma membrane; EXPRESSED IN: ovule, male gametophyte, cultured cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852); BEST Arabidopsis thaliana protein match is: pyridoxine biosynthesis 1.1 (TAIR:AT2G38230.1); Has 2527 Blast hits to 2526 proteins in 1015 species: Archae - 229; Bacteria - 1613; Metazoa - 13; Fungi - 150; Plants - 119; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink).Coding geneHOM03M001554 orphan gene
X AT2G38220RING/U-box superfamily proteinCoding geneHOM03M002318 orphan gene
X AT2G38230pyridoxine biosynthesis 1.1 (PDX1.1); FUNCTIONS IN: protein heterodimerization activity; INVOLVED IN: vitamin B6 biosynthetic process, response to absence of light; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 14 plant structures; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G01410.1); Has 4179 Blast hits to 4172 proteins in 1294 species: Archae - 234; Bacteria - 2657; Metazoa - 13; Fungi - 160; Plants - 179; Viruses - 0; Other Eukaryotes - 936 (source: NCBI BLink).Coding geneHOM03M001554 orphan gene
X AT2G382402-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteinCoding geneHOM03M000022 orphan gene
X AT2G38250Homeodomain-like superfamily proteinCoding geneHOM03M001997 orphan gene
X AT2G38255Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT2G27320.1); Has 682 Blast hits to 655 proteins in 27 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 10; Plants - 659; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03M000139 orphan gene
X AT2G38260pseudogene, similar to carboxyl transferase alpha subunit, similar to GB:U34392, however, a substitution at base 93910 in our sequence causes a stop codon in the coding region. We sequenced four clones in that region which all confirm the substitution.; blastp match of 73% identity and 2.6e-115 P-value to GP|9621818|gb|AAF89548.1|AF165158_1|AF165158 carboxyl transferase alpha subunit {Glycine max}Pseudo gene
V AT2G38270Monothiol glutaredoxin-S16, chloroplasticCoding geneHOM03M000824 orphan gene
X AT2G38280EMBRYONIC FACTOR1 (FAC1); FUNCTIONS IN: AMP deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, nucleus, microsome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365), Adenosine/AMP deaminase active site (InterPro:IPR006650), AMP deaminase (InterPro:IPR006329); Has 1191 Blast hits to 1128 proteins in 362 species: Archae - 0; Bacteria - 226; Metazoa - 390; Fungi - 271; Plants - 78; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink).Coding geneHOM03M002444 orphan gene
V AT2G38290Ammonium transporter 3 memberCoding geneHOM03M000651 orphan gene
X AT2G38300myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).Coding geneHOM03M000071 orphan gene
X AT2G38304unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).Coding geneorphan geneorphan gene
X AT2G38310Abscisic acid receptor PYL4Coding geneHOM03M000386 ORTHO03M005616
X AT2G38320TRICHOME BIREFRINGENCE-LIKE 34 (TBL34); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 35 (TAIR:AT5G01620.2); Has 1346 Blast hits to 1317 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).Coding geneHOM03M000049 orphan gene
X AT2G38325MIR390A; miRNARNA gene
V AT2G38330MATE efflux family proteinCoding geneHOM03M000704 ORTHO03M015956
X AT2G38340Integrase-type DNA-binding superfamily proteinCoding geneHOM03M000014 orphan gene
X AT2G38350unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneorphan geneorphan gene
X AT2G38360PRA1 family protein B4Coding geneHOM03M000517 ORTHO03M004229
X AT2G38365unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03M001243 orphan gene
X AT2G38370WEB family protein At2g38370Coding geneHOM03M002297 ORTHO03M001071
X AT2G38380Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to zinc ion, response to salt stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G38390.1); Has 4386 Blast hits to 4361 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 86; Plants - 4250; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).Coding geneHOM03M000017 orphan gene
X AT2G38390Peroxidase superfamily proteinCoding geneHOM03M000017 ORTHO03M007187
X AT2G38400alanine:glyoxylate aminotransferase 3Coding geneHOM03M000727 orphan gene
X AT2G38410TOM1-like protein 2Coding geneHOM03M000449 ORTHO03M007401
X AT2G38420Pentatricopeptide repeat (PPR) superfamily proteinCoding geneHOM03M000003 ORTHO03M011352
X AT2G38430unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).Coding geneHOM03M004567 orphan gene
X AT2G38440SCAR homolog 2 (SCAR2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: SCAR complex, plasma membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding WH2 (InterPro:IPR003124); BEST Arabidopsis thaliana protein match is: SCAR family protein 4 (TAIR:AT5G01730.1); Has 5162 Blast hits to 2275 proteins in 363 species: Archae - 24; Bacteria - 2785; Metazoa - 880; Fungi - 591; Plants - 224; Viruses - 0; Other Eukaryotes - 658 (source: NCBI BLink).Coding geneHOM03M001231 orphan gene
X AT2G38450CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05360.1); Has 88 Blast hits to 88 proteins in 25 species: Archae - 0; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).Coding geneHOM03M002754 ORTHO03M008395
V AT2G38460family 40 member 2Coding geneHOM03M004794 orphan gene
X AT2G38465unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03M007672 orphan gene
X AT2G38470WRKY transcription factor 33Coding geneHOM03M000024 orphan gene
X AT2G38480CASP-like protein ARALYDRAFT_321547Coding geneHOM03M002042 ORTHO03M000531
X AT2G38490CBL-interacting protein kinase 22 (CIPK22); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: SOS3-interacting protein 4 (TAIR:AT2G30360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).Coding geneHOM03M000021 orphan gene
X AT2G385002-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteinCoding geneHOM03M007054 ORTHO03M004009
V AT2G38510MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G58340.1); Has 11945 Blast hits to 11897 proteins in 2040 species: Archae - 292; Bacteria - 8615; Metazoa - 143; Fungi - 328; Plants - 1321; Viruses - 0; Other Eukaryotes - 1246 (source: NCBI BLink).Coding geneHOM03M000054 orphan gene