Table Overview Functional Clusters: Vitis vinifera top

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Data Overview


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Cluster id E-value Cluster size Chromosome MapMan Description
CH_vvi_14.6737e-8443chr18_random16.1.5secondary metabolism.isoprenoids.terpenoids
CH_vvi_25.96513e-5720chr1616.8.2secondary metabolism.flavonoids.chalcones
CH_vvi_39.96584e-5236chr1930.2.17signalling.receptor kinases.DUF 26
CH_vvi_42.19973e-4527chr916.1.5secondary metabolism.isoprenoids.terpenoids
CH_vvi_51.13309e-3919chr930.2.99signalling.receptor kinases.misc
CH_vvi_61.75043e-3618chr1326.3misc.gluco-, galacto- and mannosidases
CH_vvi_75.40331e-3617chr430.1signalling.in sugar and nutrient physiology
CH_vvi_85.00601e-3519chr934.16transport.ABC transporters and multidrug resistance systems
CH_vvi_99.06602e-3518chr1216.2secondary metabolism.phenylpropanoids
CH_vvi_101.71669e-3218chr1017.5.1hormone metabolism.ethylene.synthesis-degradation
CH_vvi_119.08935e-3237chr1820.1.7stress.biotic.PR-proteins
CH_vvi_129.60234e-3216chr626.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
CH_vvi_131.93431e-3115chr210.2.1cell wall.cellulose synthesis.cellulose synthase
CH_vvi_148.71135e-3116chr517.5.1hormone metabolism.ethylene.synthesis-degradation
CH_vvi_158.85485e-3113chr527.1.19RNA.processing.ribonucleases
CH_vvi_163.23122e-3015chr317.2.3hormone metabolism.auxin.induced-regulated-responsive-activated
CH_vvi_173.45684e-3013chr1833.1development.storage proteins
CH_vvi_184.27152e-3011chr216.5.1.3.3secondary metabolism.sulfur-containing.glucosinolates.degradation.nitrilase
CH_vvi_192.50527e-2913chr1434.2transport.sugars
CH_vvi_204.37656e-2912chr417.8.1hormone metabolism.salicylic acid.synthesis-degradation
CH_vvi_214.78054e-2917chr1420.2.99stress.abiotic.unspecified
CH_vvi_225.17782e-2914chr1110.7cell wall.modification
CH_vvi_232.26947e-2715chr1016.1.5secondary metabolism.isoprenoids.terpenoids
CH_vvi_247.16726e-2713chr1329.5.1protein.degradation.subtilases
CH_vvi_257.31543e-2713chr1617.5.2hormone metabolism.ethylene.signal transduction
CH_vvi_264.87049e-2637chr1320.1stress.biotic
CH_vvi_273.58015e-2518chr1926.9misc.glutathione S transferases
CH_vvi_282.89611e-2324chr1926.10misc.cytochrome P450
CH_vvi_291.77564e-2211chr1834.13transport.peptides and oligopeptides
CH_vvi_303.29433e-2211chr1516.7secondary metabolism.wax
CH_vvi_311.83989e-2117chr1030.2signalling.receptor kinases
CH_vvi_326.72873e-2111chr417.2.3hormone metabolism.auxin.induced-regulated-responsive-activated
CH_vvi_331.29337e-1912chrUn16.2.1.10secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD
CH_vvi_341.2208e-1812chr317.5.1hormone metabolism.ethylene.synthesis-degradation
CH_vvi_352.12251e-1820chr1930.2signalling.receptor kinases
CH_vvi_362.89287e-1843chr1220.1stress.biotic
CH_vvi_371.47614e-1712chr726.10misc.cytochrome P450
CH_vvi_387.24174e-1715chr1231.1cell.organisation
CH_vvi_391.32292e-1612chr433.99development.unspecified
CH_vvi_408.24195e-1618chrUn16secondary metabolism
CH_vvi_419.67505e-1610chr1830.2.17signalling.receptor kinases.DUF 26
CH_vvi_429.72273e-1612chr1826.10misc.cytochrome P450
CH_vvi_430.0000000000000029050611chr834.99transport.misc
CH_vvi_440.0000000000000096104611chr1816.10secondary metabolism.simple phenols
CH_vvi_450.00000000000004347320chr526misc
CH_vvi_460.00000000000016922910chr329.5.5protein.degradation.serine protease
CH_vvi_470.0000000000002364114chr531.1cell.organisation
CH_vvi_480.00000000000027083510chr916.2secondary metabolism.phenylpropanoids
CH_vvi_490.0000000000035877410chr326.10misc.cytochrome P450
CH_vvi_500.0000000000035877410chr1526.10misc.cytochrome P450
CH_vvi_510.0000000000081202510chr1320.2.1stress.abiotic.heat
CH_vvi_520.000000000011044211chr1429.5protein.degradation
CH_vvi_530.000000000020814726chrUn30.2.17signalling.receptor kinases.DUF 26
CH_vvi_540.00000000015498210chr526.2misc.UDP glucosyl and glucoronyl transferases
CH_vvi_550.00000000040415216chr520.1.7stress.biotic.PR-proteins
CH_vvi_560.00000000044645910chr1616.2secondary metabolism.phenylpropanoids
CH_vvi_570.00000000062144110chr126.12misc.peroxidases
CH_vvi_580.00000000063494310chr1327.3.37RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family
CH_vvi_590.0000000019666110chr720.1stress.biotic
CH_vvi_600.0000000027233310chr1230.2.11signalling.receptor kinases.leucine rich repeat XI
CH_vvi_610.0000000027698213chr234transport
CH_vvi_620.0000000033813311chr1816secondary metabolism
CH_vvi_630.000000004648819chr1420.1.7stress.biotic.PR-proteins
CH_vvi_640.000000006205516chr520.1stress.biotic
CH_vvi_650.0000000084501611chr120.2.99stress.abiotic.unspecified
CH_vvi_660.000000011386210chr1026.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
CH_vvi_670.000000016209812chr1211.3lipid metabolism.Phospholipid synthesis
CH_vvi_680.000000055934910chr1230.2signalling.receptor kinases
CH_vvi_690.000000085242214chr1630.2signalling.receptor kinases
CH_vvi_700.000000089553313chr1817hormone metabolism
CH_vvi_710.000000091040511chr130signalling
CH_vvi_720.00000012455114chr1030.2signalling.receptor kinases
CH_vvi_730.00000013239210chr1230.2signalling.receptor kinases
CH_vvi_740.0000002097410chr326.7misc.oxidases - copper, flavone etc
CH_vvi_750.00000023139710chr1016.4.1secondary metabolism.N misc.alkaloid-like
CH_vvi_760.00000023337212chr1626misc
CH_vvi_770.00000023811751chrUn35.2not assigned.unknown
CH_vvi_780.00000039143813chr1934transport
CH_vvi_790.00000040281314chr1920.1stress.biotic
CH_vvi_800.00000041689112chr18_random20.1.7stress.biotic.PR-proteins
CH_vvi_810.00000042393610chrUn10.2.1cell wall.cellulose synthesis.cellulose synthase
CH_vvi_820.00000046258515chr1216secondary metabolism
CH_vvi_830.00000062689321chr930.2.11signalling.receptor kinases.leucine rich repeat XI
CH_vvi_840.00000078647230chr1630.2signalling.receptor kinases
CH_vvi_850.0000019862514chr335.1not assigned.no ontology
CH_vvi_860.0000034580910chrUn26misc
CH_vvi_870.0000041678931chr1230.2signalling.receptor kinases
CH_vvi_880.00000427351149chrUn35.2not assigned.unknown
CH_vvi_890.000011427243chr1335not assigned
CH_vvi_900.000011934114chrUn30.2.17signalling.receptor kinases.DUF 26
CH_vvi_910.000013185811chr1210.6cell wall.degradation
CH_vvi_920.000018077714chrUn1PS
CH_vvi_930.000020164747chr13_random35not assigned
CH_vvi_940.000026658319chr535.2not assigned.unknown
CH_vvi_950.000026706411chr926.28misc.GDSL-motif lipase
CH_vvi_960.000035126399chr1535.2not assigned.unknown
CH_vvi_970.0000653899147chr935.2not assigned.unknown
CH_vvi_980.000066442712chr1430.3signalling.calcium
CH_vvi_990.0001037215chrUn31.1cell.organisation
CH_vvi_1000.00012328527chr1535.2not assigned.unknown
CH_vvi_1010.00014744910chr931.1cell.organisation
CH_vvi_1020.00014950811chr416secondary metabolism
CH_vvi_1030.00016618210chr217.5.1hormone metabolism.ethylene.synthesis-degradation
CH_vvi_1040.00017439719chr710cell wall
CH_vvi_1050.00018651228chr735.2not assigned.unknown
CH_vvi_1060.00022803134chr1435.2not assigned.unknown
CH_vvi_1070.00029557510chr634.12transport.metal
CH_vvi_1080.00029649510chr510.6cell wall.degradation
CH_vvi_1090.00033094411chr135.1.5not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
CH_vvi_1100.00035944816chr13_random20.1stress.biotic
CH_vvi_1110.000572217chrUn30.2.17signalling.receptor kinases.DUF 26
CH_vvi_1120.00060755210chr430signalling
CH_vvi_1130.00065268310chr629protein
CH_vvi_1140.00088384510chr134.3transport.amino acids
CH_vvi_1150.00095717720chr1935.2not assigned.unknown
CH_vvi_1160.00098352810chr634.16transport.ABC transporters and multidrug resistance systems

Experiments Overview

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal Cluster count
13InterProNo filter applied.230800.001X700
14InterProNo filter applied.101503000.001X93
15InterProNo filter applied.230800.001V68
16InterProNo filter applied.101503000.001V4
17MapManNo filter applied.230800.001X445
18MapManNo filter applied.101503000.001X116
19MapManNo filter applied.230800.001V38
20MapManNo filter applied.101503000.001V9