Table Overview Functional Clusters: Setaria italica top

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Cluster id E-value Cluster size Chromosome MapMan Description
CH_sit_15.09125e-4720scaffold_926.9misc.glutathione S transferases
CH_sit_22.9376e-4522scaffold_816.10secondary metabolism.simple phenols
CH_sit_31.59491e-3417scaffold_829.5.11.4.5.2protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ
CH_sit_49.75786e-3418scaffold_217.2.3hormone metabolism.auxin.induced-regulated-responsive-activated
CH_sit_51.82199e-3315scaffold_620.2.99stress.abiotic.unspecified
CH_sit_61.10998e-3111scaffold_530.2.20signalling.receptor kinases.wheat LRK10 like
CH_sit_72.1945e-3021scaffold_141.1PS.lightreaction
CH_sit_85.37792e-3020scaffold_129mitochondrial electron transport / ATP synthesis
CH_sit_92.33885e-2930scaffold_220.1stress.biotic
CH_sit_101.2591e-2713scaffold_629.5.11.4.5.2protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ
CH_sit_111.80961e-2720scaffold_130.2.11signalling.receptor kinases.leucine rich repeat XI
CH_sit_127.05235e-2511scaffold_726.22misc.short chain dehydrogenase/reductase (SDR)
CH_sit_131.15983e-2420scaffold_229.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
CH_sit_144.19012e-2410scaffold_927.3.41RNA.regulation of transcription.B3 transcription factor family
CH_sit_154.99588e-2416scaffold_933.99development.unspecified
CH_sit_162.9564e-2228scaffold_820.1stress.biotic
CH_sit_171.01775e-219scaffold_727.3.41RNA.regulation of transcription.B3 transcription factor family
CH_sit_184.9467e-2115scaffold_730.2.17signalling.receptor kinases.DUF 26
CH_sit_198.75185e-2118scaffold_830.2.17signalling.receptor kinases.DUF 26
CH_sit_201.16823e-208scaffold_410.3cell wall.hemicellulose synthesis
CH_sit_212.25769e-2012scaffold_526.10misc.cytochrome P450
CH_sit_222.87685e-2015scaffold_230.2.17signalling.receptor kinases.DUF 26
CH_sit_232.9565e-207scaffold_417.7.1.5hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase
CH_sit_241.12861e-198scaffold_816.8.2secondary metabolism.flavonoids.chalcones
CH_sit_252.06394e-1914scaffold_530.2.11signalling.receptor kinases.leucine rich repeat XI
CH_sit_262.18758e-1912scaffold_926.2misc.UDP glucosyl and glucoronyl transferases
CH_sit_272.45505e-197scaffold_516.8.5.1secondary metabolism.flavonoids.isoflavones.isoflavone reductase
CH_sit_281.33189e-189scaffold_910.7cell wall.modification
CH_sit_291.33425e-1810scaffold_526.9misc.glutathione S transferases
CH_sit_304.87142e-1814scaffold_429.5.11.4.2protein.degradation.ubiquitin.E3.RING
CH_sit_311.31395e-179scaffold_526.28misc.GDSL-motif lipase
CH_sit_324.60459e-1711scaffold_226.12misc.peroxidases
CH_sit_336.53091e-176scaffold_510.8.2cell wall.pectin*esterases.acetyl esterase
CH_sit_341.93989e-168scaffold_226.16misc.myrosinases-lectin-jacalin
CH_sit_353.71636e-168scaffold_929.5.11.4.5.2protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ
CH_sit_363.71636e-168scaffold_729.5.11.4.5.2protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ
CH_sit_375.22768e-1610scaffold_834.2transport.sugars
CH_sit_385.26333e-168scaffold_716.8secondary metabolism.flavonoids
CH_sit_396.20458e-1621scaffold_820.1stress.biotic
CH_sit_406.2663e-166scaffold_134.4transport.nitrate
CH_sit_410.00000000000000101198scaffold_534.13transport.peptides and oligopeptides
CH_sit_420.0000000000000021510110scaffold_629.5.11.4.5.2protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ
CH_sit_430.0000000000000024195711scaffold_526.2misc.UDP glucosyl and glucoronyl transferases
CH_sit_440.000000000000003840558scaffold_610.7cell wall.modification
CH_sit_450.0000000000000038480515scaffold_629.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
CH_sit_460.000000000000004022748scaffold_326.12misc.peroxidases
CH_sit_470.00000000000001135428scaffold_73.5minor CHO metabolism.others
CH_sit_480.00000000000001185047scaffold_127.3.27RNA.regulation of transcription.NAC domain transcription factor family
CH_sit_490.00000000000001611958scaffold_216.8.3.1secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase
CH_sit_500.000000000000027686112scaffold_820.1stress.biotic
CH_sit_510.00000000000003389375scaffold_911.8.4lipid metabolism.exotics (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase
CH_sit_520.000000000000083985416scaffold_427.3.99RNA.regulation of transcription.unclassified
CH_sit_530.0000000000001162085scaffold_116.2.1.1secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL
CH_sit_540.0000000000001280737scaffold_230.1signalling.in sugar and nutrient physiology
CH_sit_550.00000000000013326911scaffold_533.99development.unspecified
CH_sit_560.0000000000001421197scaffold_329.2.4protein.synthesis.elongation
CH_sit_570.0000000000002094648scaffold_910.7cell wall.modification
CH_sit_580.0000000000002121836scaffold_327.3.41RNA.regulation of transcription.B3 transcription factor family
CH_sit_590.0000000000002884177scaffold_334.13transport.peptides and oligopeptides
CH_sit_600.0000000000003215069scaffold_616.4.1secondary metabolism.N misc.alkaloid-like
CH_sit_610.0000000000003808927scaffold_130.2.25signalling.receptor kinases.wall associated kinase
CH_sit_620.0000000000005750237scaffold_417.5.1hormone metabolism.ethylene.synthesis-degradation
CH_sit_630.0000000000009606467scaffold_226.12misc.peroxidases
CH_sit_640.00000000000099057120scaffold_820.1stress.biotic
CH_sit_650.000000000001380357scaffold_330.2.99signalling.receptor kinases.misc
CH_sit_660.000000000001503910scaffold_226.2misc.UDP glucosyl and glucoronyl transferases
CH_sit_670.000000000001709947scaffold_630.2.25signalling.receptor kinases.wall associated kinase
CH_sit_680.000000000002017977scaffold_627.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
CH_sit_690.00000000000755465scaffold_22.2.2.1major CHO metabolism.degradation.starch.starch cleavage
CH_sit_700.000000000007656797scaffold_126.12misc.peroxidases
CH_sit_710.000000000008150944scaffold_910.5.2cell wall.cell wall proteins.proline rich proteins
CH_sit_720.00000000001532685scaffold_217.2.1hormone metabolism.auxin.synthesis-degradation
CH_sit_730.00000000001547945scaffold_533.2development.late embryogenesis abundant
CH_sit_740.00000000001796439scaffold_610.7cell wall.modification
CH_sit_750.00000000001881517scaffold_526.4.1misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase
CH_sit_760.00000000001901894scaffold_913.1.6.5.5amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase
CH_sit_770.00000000002059457scaffold_734.2transport.sugars
CH_sit_780.0000000000213895scaffold_210.2.1cell wall.cellulose synthesis.cellulose synthase
CH_sit_790.000000000026428613scaffold_229.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
CH_sit_800.0000000000266189scaffold_729.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
CH_sit_810.00000000003545626scaffold_116.1.5secondary metabolism.isoprenoids.terpenoids
CH_sit_820.00000000003635216scaffold_73.5minor CHO metabolism.others
CH_sit_830.00000000003986816scaffold_526.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
CH_sit_840.000000000046534715scaffold_820.1stress.biotic
CH_sit_850.00000000004912966scaffold_234.14transport.unspecified cations
CH_sit_860.00000000007281948scaffold_331.1cell.organisation
CH_sit_870.00000000009400347scaffold_934.13transport.peptides and oligopeptides
CH_sit_880.0000000001088398scaffold_733.99development.unspecified
CH_sit_890.0000000001121166scaffold_229.5.5protein.degradation.serine protease
CH_sit_900.0000000001179115scaffold_430.1signalling.in sugar and nutrient physiology
CH_sit_910.0000000001274596scaffold_726.3misc.gluco-, galacto- and mannosidases
CH_sit_920.00000000014699912scaffold_830.2.11signalling.receptor kinases.leucine rich repeat XI
CH_sit_930.00000000015580910scaffold_530.2signalling.receptor kinases
CH_sit_940.0000000001793214scaffold_32.2.1.3.2major CHO metabolism.degradation.sucrose.invertases.cell wall
CH_sit_950.0000000001805685scaffold_416.8.3.1secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase
CH_sit_960.0000000002062876scaffold_827.3.32RNA.regulation of transcription.WRKY domain transcription factor family
CH_sit_970.0000000002964415scaffold_634.19.3transport.Major Intrinsic Proteins.NIP
CH_sit_980.000000000303225scaffold_321.4redox.glutaredoxins
CH_sit_990.0000000003246355scaffold_411.1.10lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase
CH_sit_1000.0000000005102845scaffold_820.1.7stress.biotic.PR-proteins
CH_sit_1010.0000000007415054scaffold_323.2.2nucleotide metabolism.degradation.purine
CH_sit_1020.0000000007417364scaffold_417.8.1hormone metabolism.salicylic acid.synthesis-degradation
CH_sit_1030.0000000007801925scaffold_110.3cell wall.hemicellulose synthesis
CH_sit_1040.0000000008012835scaffold_529.5.1protein.degradation.subtilases
CH_sit_1050.0000000008785355scaffold_211.9.2.1lipid metabolism.lipid degradation.lipases.triacylglycerol lipase
CH_sit_1060.0000000008964374scaffold_413.1.5.3.1amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL
CH_sit_1070.0000000008964374scaffold_72.2.1.3.2major CHO metabolism.degradation.sucrose.invertases.cell wall
CH_sit_1080.0000000017841912scaffold_431.1cell.organisation
CH_sit_1090.000000001926137scaffold_226.2misc.UDP glucosyl and glucoronyl transferases
CH_sit_1100.000000001928546scaffold_234.99transport.misc
CH_sit_1110.000000002271677scaffold_926.10misc.cytochrome P450
CH_sit_1120.000000002395364scaffold_84.1.12glycolysis.cytosolic branch.phosphoglycerate mutase
CH_sit_1130.000000002472255scaffold_927.3.7RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family
CH_sit_1140.000000002632764scaffold_934.10transport.nucleotides
CH_sit_1150.000000002795410scaffold_129.5.11.4.2protein.degradation.ubiquitin.E3.RING
CH_sit_1160.0000000036778210scaffold_529.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
CH_sit_1170.000000003780155scaffold_626.22misc.short chain dehydrogenase/reductase (SDR)
CH_sit_1180.000000004132145scaffold_626.18misc.invertase/pectin methylesterase inhibitor family protein
CH_sit_1190.000000004800425scaffold_129.5.1protein.degradation.subtilases
CH_sit_1200.000000004800425scaffold_426.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
CH_sit_1210.000000005975187scaffold_630.2.11signalling.receptor kinases.leucine rich repeat XI
CH_sit_1220.000000005995385scaffold_326.13misc.acid and other phosphatases
CH_sit_1230.000000006402485scaffold_830.2.25signalling.receptor kinases.wall associated kinase
CH_sit_1240.000000006787546scaffold_934.13transport.peptides and oligopeptides
CH_sit_1250.000000007397296scaffold_717.2.3hormone metabolism.auxin.induced-regulated-responsive-activated
CH_sit_1260.000000008568435scaffold_917.5.1hormone metabolism.ethylene.synthesis-degradation
CH_sit_1270.000000008621713scaffold_830.2.11signalling.receptor kinases.leucine rich repeat XI
CH_sit_1280.000000009505426scaffold_520.2.1stress.abiotic.heat
CH_sit_1290.000000009851785scaffold_634.3transport.amino acids
CH_sit_1300.000000009851785scaffold_534.3transport.amino acids
CH_sit_1310.00000001593385scaffold_629.5.3protein.degradation.cysteine protease
CH_sit_1320.00000001593385scaffold_829.5.3protein.degradation.cysteine protease
CH_sit_1330.00000001600726scaffold_730.2.25signalling.receptor kinases.wall associated kinase
CH_sit_1340.00000001614646scaffold_526.28misc.GDSL-motif lipase
CH_sit_1350.00000001638225scaffold_526.4.1misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase
CH_sit_1360.00000001654357scaffold_730.2.17signalling.receptor kinases.DUF 26
CH_sit_1370.00000001920743scaffold_79.4mitochondrial electron transport / ATP synthesis.alternative oxidase
CH_sit_1380.00000001920743scaffold_513.1.5.2.41amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.sarcosine oxidase
CH_sit_1390.00000002287625scaffold_734.13transport.peptides and oligopeptides
CH_sit_1400.00000002520054scaffold_210.2.1cell wall.cellulose synthesis.cellulose synthase
CH_sit_1410.00000002520054scaffold_633.1development.storage proteins
CH_sit_1420.00000002593924scaffold_216.2.1.10secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD
CH_sit_1430.00000003441296scaffold_616.2secondary metabolism.phenylpropanoids
CH_sit_1440.000000038056317scaffold_820.1stress.biotic
CH_sit_1450.00000004703265scaffold_426.28misc.GDSL-motif lipase
CH_sit_1460.00000004703265scaffold_526.28misc.GDSL-motif lipase
CH_sit_1470.00000004801863scaffold_616.2.1.6secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT
CH_sit_1480.00000004874314scaffold_917.1.1hormone metabolism.abscisic acid.synthesis-degradation
CH_sit_1490.00000005128435scaffold_917.5.1hormone metabolism.ethylene.synthesis-degradation
CH_sit_1500.00000005896135scaffold_527.3.32RNA.regulation of transcription.WRKY domain transcription factor family
CH_sit_1510.00000006706054scaffold_929.3.2protein.targeting.mitochondria
CH_sit_1520.00000007304367scaffold_720.1stress.biotic
CH_sit_1530.00000007397986scaffold_334.13transport.peptides and oligopeptides
CH_sit_1540.00000008096334scaffold_110.6.1cell wall.degradation.cellulases and beta -1,4-glucanases
CH_sit_1550.00000009093585scaffold_327.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
CH_sit_1560.00000009332924scaffold_813.2.6.3amino acid metabolism.degradation.aromatic aa.tryptophan
CH_sit_1570.0000000983657scaffold_229.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
CH_sit_1580.0000001357954scaffold_734.14transport.unspecified cations
CH_sit_1590.0000001446537scaffold_127.3.99RNA.regulation of transcription.unclassified
CH_sit_1600.0000001599234scaffold_926.24misc.GCN5-related N-acetyltransferase
CH_sit_1610.0000001680653scaffold_317.3.2.2hormone metabolism.brassinosteroid.signal transduction.BZR
CH_sit_1620.000000171854scaffold_934.15transport.potassium
CH_sit_1630.0000001933634scaffold_216.8.2secondary metabolism.flavonoids.chalcones
CH_sit_1640.0000001995844scaffold_226.19misc.plastocyanin-like
CH_sit_1650.0000002058435scaffold_827.3.32RNA.regulation of transcription.WRKY domain transcription factor family
CH_sit_1660.0000002058435scaffold_727.3.32RNA.regulation of transcription.WRKY domain transcription factor family
CH_sit_1670.0000002066596scaffold_226.10misc.cytochrome P450
CH_sit_1680.0000002174177scaffold_426.10misc.cytochrome P450
CH_sit_1690.0000003256334scaffold_835.1.2not assigned.no ontology.agenet domain-containing protein
CH_sit_1700.0000003327485scaffold_134.2transport.sugars
CH_sit_1710.0000003560545scaffold_830.2.25signalling.receptor kinases.wall associated kinase
CH_sit_1720.00000035945311scaffold_926.10misc.cytochrome P450
CH_sit_1730.0000003668445scaffold_826.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
CH_sit_1740.0000003679014scaffold_229.5.9protein.degradation.AAA type
CH_sit_1750.0000003717967scaffold_830.2.25signalling.receptor kinases.wall associated kinase
CH_sit_1760.0000003774744scaffold_833.1development.storage proteins
CH_sit_1770.0000004032883scaffold_517.3.1.2.5hormone metabolism.brassinosteroid.synthesis-degradation.sterols.HYD1
CH_sit_1780.0000004087964scaffold_24.2.14glycolysis.plastid branch.pyruvate kinase (PK)
CH_sit_1790.0000004425344scaffold_226.16misc.myrosinases-lectin-jacalin
CH_sit_1800.0000004671136scaffold_433.99development.unspecified
CH_sit_1810.0000004801183scaffold_713.2.5.2amino acid metabolism.degradation.serine-glycine-cysteine group.glycine
CH_sit_1820.0000004801183scaffold_315.3metal handling.regulation
CH_sit_1830.0000004841294scaffold_130.1signalling.in sugar and nutrient physiology
CH_sit_1840.0000005734387scaffold_620.1stress.biotic
CH_sit_1850.0000005762233scaffold_811.6lipid metabolism.lipid transfer proteins etc
CH_sit_1860.0000005762233scaffold_711.6lipid metabolism.lipid transfer proteins etc
CH_sit_1870.000000904074scaffold_120.2.99stress.abiotic.unspecified
CH_sit_1880.0000009967174scaffold_326.21misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
CH_sit_1890.0000009967174scaffold_726.21misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
CH_sit_1900.000001056413scaffold_211.9.4.13lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase
CH_sit_1910.000001056413scaffold_611.9.4.13lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase
CH_sit_1920.000001119565scaffold_1126.12misc.peroxidases
CH_sit_1930.000001209544scaffold_926.9misc.glutathione S transferases
CH_sit_1940.000001209544scaffold_926.9misc.glutathione S transferases
CH_sit_1950.000001209544scaffold_326.9misc.glutathione S transferases
CH_sit_1960.000001273535scaffold_427.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
CH_sit_1970.000001333756scaffold_230.2.17signalling.receptor kinases.DUF 26
CH_sit_1980.000001373333scaffold_427.3.15RNA.regulation of transcription.CCAAT box binding factor family, HAP3
CH_sit_1990.000001449476scaffold_729.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
CH_sit_2000.000001733744scaffold_926.1misc.misc2
CH_sit_2010.000001733744scaffold_326.1misc.misc2
CH_sit_2020.000001747883scaffold_917.7.1.2hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase
CH_sit_2030.000001747883scaffold_926.11misc.alcohol dehydrogenases
CH_sit_2040.000001758984scaffold_113.2.6.2amino acid metabolism.degradation.aromatic aa.tyrosine
CH_sit_2050.000001920213scaffold_217.3.1.1.1hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2
CH_sit_2060.000001985385scaffold_729.5.3protein.degradation.cysteine protease
CH_sit_2070.000002045554scaffold_511.8lipid metabolism.exotics(steroids, squalene etc)
CH_sit_2080.000002115915scaffold_330.2.11signalling.receptor kinases.leucine rich repeat XI
CH_sit_2090.000002115915scaffold_530.2.11signalling.receptor kinases.leucine rich repeat XI
CH_sit_2100.000002184853scaffold_917.8.1hormone metabolism.salicylic acid.synthesis-degradation
CH_sit_2110.000002184853scaffold_534.19.2transport.Major Intrinsic Proteins.TIP
CH_sit_2120.000002184853scaffold_53.6minor CHO metabolism.callose
CH_sit_2130.00000220944scaffold_229.5.1protein.degradation.subtilases
CH_sit_2140.000002304483scaffold_716.2.1.1secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL
CH_sit_2150.000002439066scaffold_426.10misc.cytochrome P450
CH_sit_2160.000002571774scaffold_734.15transport.potassium
CH_sit_2170.000002689043scaffold_717.7.1.5hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase
CH_sit_2180.000002952544scaffold_230.2.99signalling.receptor kinases.misc
CH_sit_2190.000002986554scaffold_926.21misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
CH_sit_2200.00000304229scaffold_427.3.99RNA.regulation of transcription.unclassified
CH_sit_2210.000003265263scaffold_935.1.12not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein
CH_sit_2220.000003374944scaffold_926.7misc.oxidases - copper, flavone etc
CH_sit_2230.000003383675scaffold_227.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
CH_sit_2240.000003464564scaffold_626.1misc.misc2
CH_sit_2250.0000041260811scaffold_235.1not assigned.no ontology
CH_sit_2260.000004169934scaffold_710.7cell wall.modification
CH_sit_2270.000004224713scaffold_234.19.1transport.Major Intrinsic Proteins.PIP
CH_sit_2280.0000046533scaffold_911.1.8lipid metabolism.FA synthesis and FA elongation.acyl coa ligase
CH_sit_2290.0000046533scaffold_227.3.36RNA.regulation of transcription.Argonaute
CH_sit_2300.000004737264scaffold_627.3.69RNA.regulation of transcription.SET-domain transcriptional regulator family
CH_sit_2310.000004772864scaffold_234.2transport.sugars
CH_sit_2320.000005731366scaffold_929.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
CH_sit_2330.000005864138scaffold_635.1not assigned.no ontology
CH_sit_2340.000005879613scaffold_516.5.99.1secondary metabolism.sulfur-containing.misc.alliinase
CH_sit_2350.000005960914scaffold_820.1stress.biotic
CH_sit_2360.000006036184scaffold_226.9misc.glutathione S transferases
CH_sit_2370.0000062968712scaffold_220.1stress.biotic
CH_sit_2380.000006366784scaffold_134.13transport.peptides and oligopeptides
CH_sit_2390.000006386473scaffold_517.1.1hormone metabolism.abscisic acid.synthesis-degradation
CH_sit_2400.000006386473scaffold_835.1.1not assigned.no ontology.ABC1 family protein
CH_sit_2410.000006570519scaffold_229.5protein.degradation
CH_sit_2420.000006618424scaffold_229.5.1protein.degradation.subtilases
CH_sit_2430.000006960224scaffold_616.1.5secondary metabolism.isoprenoids.terpenoids
CH_sit_2440.000006989673scaffold_517.7.1.2hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase
CH_sit_2450.000006989673scaffold_68.3TCA / org transformation.carbonic anhydrases
CH_sit_2460.000006989673scaffold_58.3TCA / org transformation.carbonic anhydrases
CH_sit_2470.000007394863scaffold_416.8.1.21secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase
CH_sit_2480.000007576334scaffold_126.22misc.short chain dehydrogenase/reductase (SDR)
CH_sit_2490.000007718889scaffold_320.1stress.biotic
CH_sit_2500.000007919933scaffold_934.6transport.sulphate
CH_sit_2510.000008062673scaffold_31.3.2PS.calvin cycle.rubisco small subunit
CH_sit_2520.000009406323scaffold_529.2.1.2.2.13protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13
CH_sit_2530.000009718963scaffold_530.2.24signalling.receptor kinases.S-locus glycoprotein like
CH_sit_2540.00001020554scaffold_511.8lipid metabolism.exotics(steroids, squalene etc)
CH_sit_2550.00001130894scaffold_926.28misc.GDSL-motif lipase
CH_sit_2560.00001224444scaffold_734.16transport.ABC transporters and multidrug resistance systems
CH_sit_2570.00001248483scaffold_916.2.1.3secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL
CH_sit_2580.00001248483scaffold_316.2.1.3secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL
CH_sit_2590.00001248483scaffold_816.2.1.3secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL
CH_sit_2600.00001256884scaffold_926.12misc.peroxidases
CH_sit_2610.00001256884scaffold_426.12misc.peroxidases
CH_sit_2620.00001260055scaffold_230.2.11signalling.receptor kinases.leucine rich repeat XI
CH_sit_2630.00001260055scaffold_630.2.11signalling.receptor kinases.leucine rich repeat XI
CH_sit_2640.00001286435scaffold_534.16transport.ABC transporters and multidrug resistance systems
CH_sit_2650.00001393114scaffold_927.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
CH_sit_2660.00001410793scaffold_81.3.13PS.calvin cycle.rubisco interacting
CH_sit_2670.00001428834scaffold_134.99transport.misc
CH_sit_2680.00001434496scaffold_530.2.17signalling.receptor kinases.DUF 26
CH_sit_2690.00001565275scaffold_229.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
CH_sit_2700.00001573093scaffold_62.2.2.1major CHO metabolism.degradation.starch.starch cleavage
CH_sit_2710.00001623214scaffold_734.3transport.amino acids
CH_sit_2720.00001632895scaffold_926.2misc.UDP glucosyl and glucoronyl transferases
CH_sit_2730.00001632895scaffold_126.2misc.UDP glucosyl and glucoronyl transferases
CH_sit_2740.00001632895scaffold_326.2misc.UDP glucosyl and glucoronyl transferases
CH_sit_2750.00001632895scaffold_326.2misc.UDP glucosyl and glucoronyl transferases
CH_sit_2760.00001632895scaffold_726.2misc.UDP glucosyl and glucoronyl transferases
CH_sit_2770.0000168334scaffold_226.7misc.oxidases - copper, flavone etc
CH_sit_2780.0000175463scaffold_716.8.2secondary metabolism.flavonoids.chalcones
CH_sit_2790.00002079534scaffold_910.7cell wall.modification
CH_sit_2800.00002079534scaffold_110.7cell wall.modification
CH_sit_2810.00002079534scaffold_410.7cell wall.modification
CH_sit_2820.00002145537scaffold_530.2.17signalling.receptor kinases.DUF 26
CH_sit_2830.0000218883scaffold_234.10transport.nucleotides
CH_sit_2840.0000218883scaffold_734.10transport.nucleotides
CH_sit_2850.00002274576scaffold_226.2misc.UDP glucosyl and glucoronyl transferases
CH_sit_2860.00002291865scaffold_627.3.67RNA.regulation of transcription.putative transcription regulator
CH_sit_2870.00002352876scaffold_520.1stress.biotic
CH_sit_2880.00002381723scaffold_511.1.10lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase
CH_sit_2890.0000246626scaffold_516.10secondary metabolism.simple phenols
CH_sit_2900.00002936565scaffold_820.2.1stress.abiotic.heat
CH_sit_2910.00003375424scaffold_927.3.67RNA.regulation of transcription.putative transcription regulator
CH_sit_2920.00003731043scaffold_431.3.1cell.cycle.peptidylprolyl isomerase
CH_sit_2930.00003731043scaffold_323.2nucleotide metabolism.degradation
CH_sit_2940.00003885743scaffold_427.3.5RNA.regulation of transcription.ARR
CH_sit_2950.00003917574scaffold_529.5.5protein.degradation.serine protease
CH_sit_2960.00004033554scaffold_227.3.25RNA.regulation of transcription.MYB domain transcription factor family
CH_sit_2970.00004161054scaffold_226.21misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
CH_sit_2980.00004602994scaffold_127.1.19RNA.processing.ribonucleases
CH_sit_2990.00004744243scaffold_235.1.41not assigned.no ontology.hydroxyproline rich proteins
CH_sit_3000.00004744243scaffold_821.4redox.glutaredoxins
CH_sit_3010.00004744243scaffold_626.1misc.misc2
CH_sit_3020.00005118783scaffold_617.5.2hormone metabolism.ethylene.signal transduction
CH_sit_3030.00005354646scaffold_910.7cell wall.modification
CH_sit_3040.00005615153scaffold_710.3cell wall.hemicellulose synthesis
CH_sit_3050.00005635494scaffold_926.28misc.GDSL-motif lipase
CH_sit_3060.00005645666scaffold_534transport
CH_sit_3070.00005657872scaffold_116.5.1.3.3secondary metabolism.sulfur-containing.glucosinolates.degradation.nitrilase
CH_sit_3080.00005657872scaffold_511.8.1.1lipid metabolism.exotics (steroids, squalene etc).sphingolipids.ceramidase
CH_sit_3090.00005657872scaffold_916.1.1.7secondary metabolism.isoprenoids.non-mevalonate pathway.HDR
CH_sit_3100.00005657872scaffold_72.2.2.9major CHO metabolism.degradation.starch.limit dextrinase/ pullulanase
CH_sit_3110.00005657872scaffold_523.1.1.5nucleotide metabolism.synthesis.pyrimidine.orotate phosphoribosyltransferase
CH_sit_3120.00005657872scaffold_523.1.2.6nucleotide metabolism.synthesis.purine.AIR carboxylase
CH_sit_3130.00005657872scaffold_410.1.8cell wall.precursor synthesis.GER
CH_sit_3140.00005657872scaffold_916.8.4secondary metabolism.flavonoids.flavonols
CH_sit_3150.00005657872scaffold_930.2.9signalling.receptor kinases.leucine rich repeat IX
CH_sit_3160.00005657872scaffold_118.13Co-factor and vitamine metabolism.isochorismatase
CH_sit_3170.00005657872scaffold_15.1fermentation.LDH
CH_sit_3180.000057490414scaffold_820.1stress.biotic
CH_sit_3190.000057552512scaffold_430.2signalling.receptor kinases
CH_sit_3200.00006101254scaffold_534.16transport.ABC transporters and multidrug resistance systems
CH_sit_3210.00006262734scaffold_926.12misc.peroxidases
CH_sit_3220.00006262734scaffold_426.12misc.peroxidases
CH_sit_3230.00006262734scaffold_326.12misc.peroxidases
CH_sit_3240.00006288843scaffold_827.3.8RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family
CH_sit_3250.00006375635scaffold_926.10misc.cytochrome P450
CH_sit_3260.00007014323scaffold_220.1.7stress.biotic.PR-proteins
CH_sit_3270.00007014323scaffold_520.1.7stress.biotic.PR-proteins
CH_sit_3280.0000712074scaffold_729.5.3protein.degradation.cysteine protease
CH_sit_3290.00008088415scaffold_729.5.11.4.2protein.degradation.ubiquitin.E3.RING
CH_sit_3300.00008846943scaffold_511.9.2.1lipid metabolism.lipid degradation.lipases.triacylglycerol lipase
CH_sit_3310.00009803977scaffold_535.1not assigned.no ontology
CH_sit_3320.00009999873scaffold_116.8.3.1secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase
CH_sit_3330.00009999873scaffold_516.8.3.1secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase
CH_sit_3340.00009999873scaffold_129.5.11.3protein.degradation.ubiquitin.E2
CH_sit_3350.00009999873scaffold_329.5.11.3protein.degradation.ubiquitin.E2
CH_sit_3360.0001148583scaffold_933.1development.storage proteins
CH_sit_3370.0001151933scaffold_110.5.3cell wall.cell wall proteins.LRR
CH_sit_3380.0001268216scaffold_427.3.99RNA.regulation of transcription.unclassified
CH_sit_3390.0001275723scaffold_217.1.1hormone metabolism.abscisic acid.synthesis-degradation
CH_sit_3400.0001331073scaffold_916.1.5secondary metabolism.isoprenoids.terpenoids
CH_sit_3410.0001331073scaffold_926.19misc.plastocyanin-like
CH_sit_3420.0001331073scaffold_726.21misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
CH_sit_3430.0001351354scaffold_929.5.11.4.5.2protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ
CH_sit_3440.0001405023scaffold_229.5.11.1protein.degradation.ubiquitin.ubiquitin
CH_sit_3450.0001500125scaffold_926.2misc.UDP glucosyl and glucoronyl transferases
CH_sit_3460.0001561043scaffold_327.3.21RNA.regulation of transcription.GRAS transcription factor family
CH_sit_3470.0001561043scaffold_827.3.21RNA.regulation of transcription.GRAS transcription factor family
CH_sit_3480.0001561043scaffold_727.3.21RNA.regulation of transcription.GRAS transcription factor family
CH_sit_3490.000160295scaffold_920.1stress.biotic
CH_sit_3500.0001657014scaffold_334.2transport.sugars
CH_sit_3510.0001697362scaffold_213.1.3.5.5amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate decarboxylase
CH_sit_3520.0001697362scaffold_216.1.2.7secondary metabolism.isoprenoids.mevalonate pathway.isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase
CH_sit_3530.0001697362scaffold_816.2.1.9secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT
CH_sit_3540.0001697362scaffold_92.1.2.5major CHO metabolism.synthesis.starch.transporter
CH_sit_3550.0001697362scaffold_93.1.1.2minor CHO metabolism.raffinose family.galactinol synthases.putative
CH_sit_3560.0001697362scaffold_929.1.11protein.aa activation.serine-tRNA ligase
CH_sit_3570.0001697362scaffold_419.21tetrapyrrole synthesis.heme oxygenase
CH_sit_3580.0001697362scaffold_725.4C1-metabolism.5-formyltetrahydrofolate cyclo-ligase
CH_sit_3590.0001697362scaffold_313.1.6.1.10amino acid metabolism.synthesis.aromatic aa.chorismate.dehydroquinate/shikimate dehydrogenase
CH_sit_3600.0001697362scaffold_629.2.1.2.1.13protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S13
CH_sit_3610.0001753983scaffold_927.3.7RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family
CH_sit_3620.0001792885scaffold_526.9misc.glutathione S transferases
CH_sit_3630.0001824114scaffold_534.16transport.ABC transporters and multidrug resistance systems
CH_sit_3640.0001872354scaffold_526.12misc.peroxidases
CH_sit_3650.0001872354scaffold_526.12misc.peroxidases
CH_sit_3660.0001893864scaffold_926.22misc.short chain dehydrogenase/reductase (SDR)
CH_sit_3670.0002019134scaffold_131.3cell.cycle
CH_sit_3680.000207494scaffold_917.2.3hormone metabolism.auxin.induced-regulated-responsive-activated
CH_sit_3690.0002097453scaffold_329.5.9protein.degradation.AAA type
CH_sit_3700.000213174scaffold_330.2.17signalling.receptor kinases.DUF 26
CH_sit_3710.000213174scaffold_530.2.17signalling.receptor kinases.DUF 26
CH_sit_3720.0002368313scaffold_329.3.2protein.targeting.mitochondria
CH_sit_3730.0002389786scaffold_829.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII
CH_sit_3740.000240653scaffold_729.5.1protein.degradation.subtilases
CH_sit_3750.000240653scaffold_926.16misc.myrosinases-lectin-jacalin
CH_sit_3760.000240653scaffold_226.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
CH_sit_3770.000240653scaffold_626.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
CH_sit_3780.0002483912scaffold_529.5protein.degradation
CH_sit_3790.000249313scaffold_734.7transport.phosphate
CH_sit_3800.0002550555scaffold_134.13transport.peptides and oligopeptides
CH_sit_3810.0002583743scaffold_616.8.1.21secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase
CH_sit_3820.0002695784scaffold_329.5.11.4.5.2protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ
CH_sit_3830.000274453scaffold_926.13misc.acid and other phosphatases
CH_sit_3840.000274453scaffold_626.13misc.acid and other phosphatases
CH_sit_3850.0002760176scaffold_816.2secondary metabolism.phenylpropanoids
CH_sit_3860.0002847894scaffold_727.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
CH_sit_3870.0002863833scaffold_610.6.3cell wall.degradation.pectate lyases and polygalacturonases
CH_sit_3880.0002902934scaffold_926.2misc.UDP glucosyl and glucoronyl transferases
CH_sit_3890.0002902934scaffold_826.2misc.UDP glucosyl and glucoronyl transferases
CH_sit_3900.00030721511scaffold_929.5protein.degradation
CH_sit_3910.0003111493scaffold_430.1signalling.in sugar and nutrient physiology
CH_sit_3920.0003188994scaffold_326.10misc.cytochrome P450
CH_sit_3930.0003188994scaffold_626.10misc.cytochrome P450
CH_sit_3940.0003188994scaffold_726.10misc.cytochrome P450
CH_sit_3950.00032306121scaffold_235.2not assigned.unknown
CH_sit_3960.000337824scaffold_429.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII
CH_sit_3970.0003383095scaffold_110.7cell wall.modification
CH_sit_3980.0003394532scaffold_122.1.5polyamine metabolism.synthesis.N-carbamoylputrescine amidohydrolase
CH_sit_3990.0003394532scaffold_329.2.1.1.1.1.17protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S17
CH_sit_4000.0003394722scaffold_32.1.1.2major CHO metabolism.synthesis.sucrose.SPP
CH_sit_4010.0003394722scaffold_511.8.3lipid metabolism.exotics (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase
CH_sit_4020.0003394722scaffold_922.2.1polyamine metabolism.degradation.polyamin oxidase
CH_sit_4030.0003394722scaffold_726.3.5misc.gluco-, galacto- and mannosidases.glycosyl hydrolase family 5
CH_sit_4040.0003394722scaffold_229.2.1.2.2.19protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L19
CH_sit_4050.0003394722scaffold_229.2.1.2.2.32protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32
CH_sit_4060.0003394722scaffold_329.5.11.4.4protein.degradation.ubiquitin.E3.APC
CH_sit_4070.0003763935scaffold_126.10misc.cytochrome P450
CH_sit_4080.0004096943scaffold_520.2.99stress.abiotic.unspecified
CH_sit_4090.0004527555scaffold_830.2.17signalling.receptor kinases.DUF 26
CH_sit_4100.0004736523scaffold_926.1misc.misc2
CH_sit_4110.0004751355scaffold_529.4protein.postranslational modification
CH_sit_4120.0004758923scaffold_416.8.3secondary metabolism.flavonoids.dihydroflavonols
CH_sit_4130.0004758923scaffold_910.1cell wall.precursor synthesis
CH_sit_4140.0004898276scaffold_131.1cell.organisation
CH_sit_4150.0005225353scaffold_71.2.6PS.photorespiration.hydroxypyruvate reductase
CH_sit_4160.0005483864scaffold_231.1cell.organisation
CH_sit_4170.0005483864scaffold_331.1cell.organisation
CH_sit_4180.0005657392scaffold_717.1.1.1.1hormone metabolism.abscisic acid.synthesis-degradation.synthesis.zeaxanthin epoxidase
CH_sit_4190.0005657872scaffold_913.1.1.3.1amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase
CH_sit_4200.0005657872scaffold_311.9.3.2lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase
CH_sit_4210.0005657872scaffold_613.2.3.2amino acid metabolism.degradation.aspartate family.threonine
CH_sit_4220.0005657872scaffold_917.7.1.3hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase
CH_sit_4230.0005657872scaffold_43.1.2.1minor CHO metabolism.raffinose family.raffinose synthases.known
CH_sit_4240.0005657872scaffold_311.3.1lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase
CH_sit_4250.0005657872scaffold_129.1.1protein.aa activation.tyrosine-tRNA ligase
CH_sit_4260.0005657872scaffold_229.1.7protein.aa activation.alanine-tRNA ligase
CH_sit_4270.0006030173scaffold_226.22misc.short chain dehydrogenase/reductase (SDR)
CH_sit_4280.0006030173scaffold_226.22misc.short chain dehydrogenase/reductase (SDR)
CH_sit_4290.0006030173scaffold_726.22misc.short chain dehydrogenase/reductase (SDR)
CH_sit_4300.0006231183scaffold_929.3.4.99protein.targeting.secretory pathway.unspecified
CH_sit_4310.0006678126scaffold_420.1stress.biotic
CH_sit_4320.0006801313scaffold_910.6.1cell wall.degradation.cellulases and beta -1,4-glucanases
CH_sit_4330.00069212530scaffold_435.2not assigned.unknown
CH_sit_4340.0006982894scaffold_126.7misc.oxidases - copper, flavone etc
CH_sit_4350.0007201234scaffold_127.2RNA.transcription
CH_sit_4360.0007303433scaffold_934.12transport.metal
CH_sit_4370.0007481645scaffold_728.1DNA.synthesis/chromatin structure
CH_sit_4380.0008244793scaffold_230.2.25signalling.receptor kinases.wall associated kinase
CH_sit_4390.0008244793scaffold_330.2.25signalling.receptor kinases.wall associated kinase
CH_sit_4400.0008378533scaffold_329.5.9protein.degradation.AAA type
CH_sit_4410.000848682scaffold_717.3.1.1.1hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2
CH_sit_4420.000848682scaffold_717.6.1.13hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase
CH_sit_4430.000848682scaffold_723.3.2.2nucleotide metabolism.salvage.nucleoside kinases.uridine kinase
CH_sit_4440.000848682scaffold_21.2.2PS.photorespiration.glycolate oxydase
CH_sit_4450.000848682scaffold_71.2.2PS.photorespiration.glycolate oxydase
CH_sit_4460.000848682scaffold_31.3.2PS.calvin cycle.rubisco small subunit
CH_sit_4470.000848682scaffold_910.5.2cell wall.cell wall proteins.proline rich proteins
CH_sit_4480.000848682scaffold_720.2.4stress.abiotic.touch/wounding
CH_sit_4490.000848682scaffold_329.7.5protein.glycosylation.alpha-1,3-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTI)
CH_sit_4500.0008829183scaffold_511.9.2.1lipid metabolism.lipid degradation.lipases.triacylglycerol lipase
CH_sit_4510.0009188563scaffold_13.5minor CHO metabolism.others
CH_sit_4520.0009188563scaffold_53.5minor CHO metabolism.others
CH_sit_4530.0009445955scaffold_620.1stress.biotic
CH_sit_4540.0009751974scaffold_729.5.5protein.degradation.serine protease
CH_sit_4550.0009803283scaffold_317.5.1hormone metabolism.ethylene.synthesis-degradation
CH_sit_4560.0009860184scaffold_434.99transport.misc

Experiments Overview

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal Cluster count
13InterProNo filter applied.230800.001X778
14InterProNo filter applied.101503000.001X81
15InterProNo filter applied.230800.001V32
16InterProNo filter applied.101503000.001V2
17MapManNo filter applied.230800.001X456
18MapManNo filter applied.101503000.001X86
19MapManNo filter applied.230800.001V21
20MapManNo filter applied.101503000.001V6