Table Overview Functional Clusters: Oryza sativa ssp. japonica top

Data Overview


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Cluster id E-value Cluster size Chromosome InterPro Description
CH_osa_14.97525e-17305IPR001878Zinc finger, CCHC-type
CH_osa_20.000000000000058648961IPR025287Wall-associated receptor kinase galacturonan-binding domain
CH_osa_30.00000000000882549178IPR013242Retroviral aspartyl protease
CH_osa_40.0000000000541715910IPR017972Cytochrome P450, conserved site
CH_osa_50.000000000097022964IPR013227PAN-2 domain
CH_osa_60.000000000242829611IPR008974TRAF-like
CH_osa_70.000000000442424235IPR001878Zinc finger, CCHC-type
CH_osa_80.00000000060090648IPR002925Dienelactone hydrolase
CH_osa_90.00000000212736511IPR003441NAC domain
CH_osa_100.0000000061164852IPR019400Peptidase C65, otubain
CH_osa_110.00000000741984166IPR013242Retroviral aspartyl protease
CH_osa_120.000000010719711IPR002182NB-ARC
CH_osa_130.000000010934151IPR000109Proton-dependent oligopeptide transporter family
CH_osa_140.0000000113316811IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
CH_osa_150.0000000116215143IPR001878Zinc finger, CCHC-type
CH_osa_160.0000000267311147IPR013242Retroviral aspartyl protease
CH_osa_170.0000000465746712IPR001810F-box domain
CH_osa_180.000000056023649IPR009003Trypsin-like cysteine/serine peptidase domain
CH_osa_190.00000010446846IPR019794Peroxidase, active site
CH_osa_200.00000013489343IPR003676Auxin-induced protein, ARG7
CH_osa_210.00000022917835IPR012438Protein of unknown function DUF1639
CH_osa_220.00000041050969IPR024788Malectin-like carbohydrate-binding domain
CH_osa_230.00000074976448IPR001220Legume lectin domain
CH_osa_240.0000007524661410IPR001878Zinc finger, CCHC-type
CH_osa_250.0000010222178IPR021109Aspartic peptidase domain
CH_osa_260.0000010692637IPR011424C1-like
CH_osa_270.0000011188851IPR000823Plant peroxidase
CH_osa_280.00000114241218IPR005162Retrotransposon gag domain
CH_osa_290.0000014510153IPR016138Ribosome-inactivating protein, subdomain 1
CH_osa_300.00000156081910IPR023780Chromo domain
CH_osa_310.0000018506133IPR027923Hydrophobic seed protein
CH_osa_320.00000229127312IPR002208SecY/SEC61-alpha family
CH_osa_330.000002382241310IPR021109Aspartic peptidase domain
CH_osa_340.00000292286164IPR001878Zinc finger, CCHC-type
CH_osa_350.00000320755311IPR002925Dienelactone hydrolase
CH_osa_360.00000356936215IPR000477Reverse transcriptase
CH_osa_370.0000037419134IPR022251Protein of unknown function wound-induced
CH_osa_380.0000048511551IPR004158Protein of unknown function DUF247, plant
CH_osa_390.0000049655334IPR004813Oligopeptide transporter, OPT superfamily
CH_osa_400.00000531298205IPR005162Retrotransposon gag domain
CH_osa_410.00000728645IPR019794Peroxidase, active site
CH_osa_420.0000081268642IPR002401Cytochrome P450, E-class, group I
CH_osa_430.000010269464IPR025287Wall-associated receptor kinase galacturonan-binding domain
CH_osa_440.00001328441112IPR001878Zinc finger, CCHC-type
CH_osa_450.0000144648612IPR002182NB-ARC
CH_osa_460.0000148393311IPR006702Uncharacterised protein family UPF0497, trans-membrane plant
CH_osa_470.00001738711012IPR025724GAG-pre-integrase domain
CH_osa_480.000017564935IPR020636Calcium/calmodulin-dependent/calcium-dependent protein kinase
CH_osa_490.0000209678114IPR021109Aspartic peptidase domain
CH_osa_500.00002228031910IPR001878Zinc finger, CCHC-type
CH_osa_510.000027943295IPR021109Aspartic peptidase domain
CH_osa_520.000028991132IPR010259Proteinase inhibitor I9
CH_osa_530.000041662435IPR018202Peptidase S10, serine carboxypeptidase, active site
CH_osa_540.0000513854411IPR000109Proton-dependent oligopeptide transporter family
CH_osa_550.0000519429311IPR015554Serpin, plant
CH_osa_560.000052481944IPR016196Major facilitator superfamily domain, general substrate transporter
CH_osa_570.0000589294311IPR012871Protein of unknown function DUF1677, Oryza sativa
CH_osa_580.000069370248IPR027443Isopenicillin N synthase-like
CH_osa_590.0000695177137IPR013242Retroviral aspartyl protease
CH_osa_600.0000914679208IPR000477Reverse transcriptase
CH_osa_610.000102905711IPR002182NB-ARC
CH_osa_620.00010704522IPR003173Transcriptional coactivator p15 (PC4)
CH_osa_630.00010704521IPR001765Carbonic anhydrase
CH_osa_640.00010704524IPR003746Protein of unknown function DUF167
CH_osa_650.000107045211IPR008676MRG
CH_osa_660.00010704524IPR008922Uncharacterised domain, di-copper centre
CH_osa_670.00010704522IPR010821Chlorophyllase
CH_osa_680.000107045211IPR024644Interferon-induced protein 44 family
CH_osa_690.00010704528IPR027059Coatomer delta subunit
CH_osa_700.000111721912IPR000477Reverse transcriptase
CH_osa_710.00011404252IPR008552Domain of unknown function DUF834
CH_osa_720.000115895311IPR013227PAN-2 domain
CH_osa_730.00012150859IPR013242Retroviral aspartyl protease
CH_osa_740.000131539185IPR001878Zinc finger, CCHC-type
CH_osa_750.000131539188IPR001878Zinc finger, CCHC-type
CH_osa_760.000143851011IPR002290Serine/threonine- / dual specificity protein kinase, catalytic domain
CH_osa_770.00015102739IPR010285DNA helicase Pif1
CH_osa_780.00016576686IPR005162Retrotransposon gag domain
CH_osa_790.000180289184IPR005162Retrotransposon gag domain
CH_osa_800.00021408323IPR001266Ribosomal protein S19e
CH_osa_810.00021409126IPR000845Nucleoside phosphorylase domain
CH_osa_820.00021409126IPR008584Protein of unknown function DUF866, eukaryotic
CH_osa_830.00021409127IPR022617Rad60/SUMO-like domain
CH_osa_840.00022502945IPR002213UDP-glucuronosyl/UDP-glucosyltransferase
CH_osa_850.00022502947IPR010685Domain of unknown function DUF1263
CH_osa_860.00026076831IPR022149Protein of unknown function DUF3681
CH_osa_870.000261212310IPR000626Ubiquitin domain
CH_osa_880.0003070382310IPR012337Ribonuclease H-like domain
CH_osa_890.00033662679IPR007228Domain of unknown function DUF390
CH_osa_900.00034855433IPR009003Trypsin-like cysteine/serine peptidase domain
CH_osa_910.00035679923IPR003451LytB protein
CH_osa_920.0003568182chloroplastIPR006216Photosystem II cytochrome b559, conserved site
CH_osa_930.000459155412IPR001471AP2/ERF domain
CH_osa_940.000479637IPR013771Bifunctional trypsin/alpha-amylase inhibitor helical domain
CH_osa_950.00053518922IPR015419EKC/KEOPS complex, subunit Pcc1
CH_osa_960.00053522723IPR007757MT-A70-like
CH_osa_970.00053522726IPR012951Berberine/berberine-like
CH_osa_980.00053522725IPR023564Ribosomal protein L13 domain
CH_osa_990.00057075184IPR005162Retrotransposon gag domain
CH_osa_1000.000640893510IPR001969Aspartic peptidase, active site
CH_osa_1010.00064224522IPR010851S locus-related glycoprotein 1 binding pollen coat
CH_osa_1020.000745777137IPR001878Zinc finger, CCHC-type
CH_osa_1030.000749318210IPR000277Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
CH_osa_1040.00074931823IPR007011Seed maturation protein
CH_osa_1050.0007493182chloroplastIPR007066RNA polymerase Rpb1, domain 3
CH_osa_1060.00074931824IPR008797Photosystem II PsbQ, oxygen evolving complex
CH_osa_1070.000770937158IPR005162Retrotransposon gag domain
CH_osa_1080.000788551410IPR025875Leucine rich repeat 4
CH_osa_1090.0008479383chloroplastIPR001750NADH:ubiquinone/plastoquinone oxidoreductase
CH_osa_1100.000889765126IPR001584Integrase, catalytic core
CH_osa_1110.00089222939IPR001471AP2/ERF domain
CH_osa_1120.0009990921IPR003822Paired amphipathic helix
CH_osa_1130.00099909212IPR021369Protein of unknown function DUF2985

Experiments Overview

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal Cluster count
13InterProNo filter applied.230800.001X858
14InterProNo filter applied.101503000.001X144
15InterProNo filter applied.230800.001V113
16InterProNo filter applied.101503000.001V46
17MapManNo filter applied.230800.001X431
18MapManNo filter applied.101503000.001X124
19MapManNo filter applied.230800.001V45
20MapManNo filter applied.101503000.001V46