Functional clusters   top

Information

Type
Mapman term
Identifier
16.10
Description
secondary metabolism.simple phenols

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyonBd217CH_bdi_1835390.000050864
Brachypodium distachyonBd317CH_bdi_221340.000243365
Brachypodium distachyonBd317CH_bdi_152490.00000950027
Brachypodium distachyonBd417CH_bdi_376100.000000000022356
Oryza sativa ssp. japonica117CH_osa_1596710.000000168126
Oryza sativa ssp. japonica517CH_osa_297340.0000382155
Populus trichocarpaChr0117CH_ptr_470340.000685076
Populus trichocarpaChr0517CH_ptr_380330.000171476
Populus trichocarpaChr0617CH_ptr_381330.000171476
Populus trichocarpaChr1517CH_ptr_245450.00000134822
Populus trichocarpaChr1617CH_ptr_2227620.000000437543
Populus trichocarpaChr1917CH_ptr_130550.000000000418353
Setaria italicascaffold_517CH_sit_2896600.000024662
Setaria italicascaffold_817CH_sit_222512.9376e-45
Setaria italicascaffold_818CH_sit_222512.9376e-45
Solanum lycopersicumch0517CH_sly_104570.00000000065233
Solanum lycopersicumch0617CH_sly_313330.0000355245
Vitis viniferachr1817CH_vvi_6511550.00000000000000961046
Vitis viniferachr18_random17CH_vvi_4912556.58736e-17
Vitis viniferachr717CH_vvi_2015110.000000626849
Vitis viniferachr817CH_vvi_180590.000000171569
Vitis viniferachr1818CH_vvi_4411550.00000000000000961046
Zea mays317CH_zma_755410.000000544911

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V