PLAZA 3.0 Dicots gene overview : ZM07G29120

Gene: ZM07G29120 (Zea mays)

Overview

Gene Identifier: ZM07G29120
Transcript Identifier: ZM07G29120.1
Gene Type: Coding gene
Location: 7 : 170566136-170568832 : positive

Family

Gene family: HOM03D000074
(1202 genes in 31 species)
specific family
Subfamily: ORTHO03D000004
(430 genes in 27 species)
specific family

Loading...please wait

Descriptions

Description: LOC100282438

Description (AnnoMine): 2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase

Identifiers

Identifier	Name
name	GRMZM2G148176
pid	GRMZM2G148176_P01

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...the gene in Genomeview, a genome browser
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0008152	IEA	PLAZA Homology	metabolic process	HOM03D000074
GO:0071704	IEA	PLAZA Homology	organic substance metabolic process	HOM03D000074
GO:0044238	IEA	PLAZA Homology	primary metabolic process	HOM03D000074

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003824	IEA	InterPro	catalytic activity
GO:0004553	IEA	InterPro	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787	IEA	PLAZA Homology	hydrolase activity	HOM03D000074
GO:0016798	IEA	PLAZA Homology	hydrolase activity, acting on glycosyl bonds	HOM03D000074
GO:0033907	ISO	PLAZA Integrative Orthology	beta-D-fucosidase activity	OS07G46280
GO:0004565	ISO	PLAZA Integrative Orthology	beta-galactosidase activity	OS07G46280
GO:0047701	ISO	PLAZA Integrative Orthology	beta-L-arabinosidase activity	OS07G46280
GO:0004567	ISO	PLAZA Integrative Orthology	beta-mannosidase activity	OS07G46280
GO:0080079	ISO	PLAZA Integrative Orthology	cellobiose glucosidase activity	OS07G46280
GO:0004338	ISO	PLAZA Integrative Orthology	glucan exo-1,3-beta-glucosidase activity	OS07G46280

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001360	Glycoside hydrolase, family 1
IPR013781	Glycoside hydrolase, catalytic domain
IPR017853	Glycoside hydrolase, superfamily

Mapman id	Description
26.3	misc.gluco-, galacto- and mannosidases

SignalP	Description
SignalP-noTM	Signal Peptide detected using noTM network