Gene: ZM07G22270 (Zea mays)

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Gene Identifier
ZM07G22270
Transcript Identifier
ZM07G22270.1
Gene Type
Coding gene
Location
7 : 150159576-150178262 : positive

Family

Gene family
HOM03D000113
(850 genes in 31 species)
specific family
Subfamily
ORTHO03D001832
(46 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
CHD3-type chromatin-remodeling factor PICKLE
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameGRMZM2G316191
pidGRMZM2G316191_P01

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009739ISOPLAZA Integrative Orthologyresponse to gibberellin stimulusAT2G25170
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT2G25170
GO:0008283ISOPLAZA Integrative Orthologycell proliferationAT2G25170
GO:0009788ISOPLAZA Integrative Orthologynegative regulation of abscisic acid-activated signaling pathwayAT2G25170
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinAT2G25170
GO:2000023ISOPLAZA Integrative Orthologyregulation of lateral root developmentAT2G25170
GO:0009736ISOPLAZA Integrative Orthologycytokinin-activated signaling pathwayAT2G25170
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT2G25170

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0004386IEAInterProhelicase activity
GO:0008270IEAInterProzinc ion binding
GO:0003676IEAInterPronucleic acid binding
GO:0005524IEAInterProATP binding
GO:0003677IEAInterProDNA binding
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000113
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03D000113
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000113
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000113
GO:0043167IEAPLAZA Homologyion bindingHOM03D000113
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000113
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000113
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03D000113
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000113
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000113
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03D000113
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03D000113
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000113
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000113
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000113
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000113
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03D000113
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000113
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000113
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000113
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000113
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000113
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000113

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT5G44800
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G25170

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR019787Zinc finger, PHD-finger
IPR001650Helicase, C-terminal
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR009057Homeodomain-like
IPR016197Chromo domain-like
IPR023780Chromo domain
IPR000330SNF2-related
IPR019786Zinc finger, PHD-type, conserved site
IPR017877Myb-like domain
IPR009463Domain of unknown function DUF1087
IPR000953Chromo domain/shadow
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR011011Zinc finger, FYVE/PHD-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR001965Zinc finger, PHD-type

Mapman id Description
27.3.44RNA.regulation of transcription.Chromatin Remodeling Factors
No SignalP domains detected for this gene.