Gene: VV13G03800 (Vitis vinifera)

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Gene Identifier
VV13G03800
Transcript Identifier
VV13G03800.1
Gene Type
Coding gene
Location
chr13 : 4668323-4712147 : positive

Family

Gene family
HOM03D003793
(49 genes in 31 species)
specific family
Subfamily
ORTHO03D006643
(32 genes in 28 species)
specific family

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Descriptions

Description (AnnoMine)
Regulator of nonsense transcripts UPF2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidGSVIVG01016353001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009863ISOPLAZA Integrative Orthologysalicylic acid mediated signaling pathwayAT2G39260
GO:0009611ISOPLAZA Integrative Orthologyresponse to woundingAT2G39260
GO:0000184ISOPLAZA Integrative Orthologynuclear-transcribed mRNA catabolic process, nonsense-mediated decayAT2G39260
GO:0009867ISOPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT2G39260
GO:0048571ISOPLAZA Integrative Orthologylong-day photoperiodismAT2G39260
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT2G39260

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0005488IEAInterProbinding
GO:0003723IEAInterProRNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT2G39260
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT2G39260

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007193Up-frameshift suppressor 2
IPR003890MIF4G-like, type 3
IPR016024Armadillo-type fold
IPR016021MIF4-like, type 1/2/3

Mapman id Description
29.2.99protein.synthesis.misc
No SignalP domains detected for this gene.