Gene: VV08G11440 (Vitis vinifera)

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Gene Identifier
VV08G11440
Transcript Identifier
VV08G11440.1
Gene Type
Coding gene
Location
chr8 : 17963002-17965267 : positive

Family

Gene family
HOM03D001459
(109 genes in 30 species)
specific family
Subfamily
ORTHO03D028207
(4 genes in 2 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Histone deacetylase HDT1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidGSVIVG01033775001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010162ISOPLAZA Integrative Orthologyseed dormancy processAT5G22650 AT3G44750 AT2G27840
GO:0009294ISOPLAZA Integrative OrthologyDNA mediated transformationAT5G22650 AT3G44750
GO:0009944ISOPLAZA Integrative Orthologypolarity specification of adaxial/abaxial axisAT5G22650 AT3G44750
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT5G22650 AT5G03740
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT5G03740
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT5G03740
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT5G03740
GO:0030422ISOPLAZA Integrative Orthologyproduction of siRNA involved in RNA interferenceAT2G27840

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D001459

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT5G22650
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G22650
GO:0005774ISOPLAZA Integrative Orthologyvacuolar membraneAT5G22650
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT5G22650 AT5G03740 AT3G44750 AT2G27840
GO:0005618ISOPLAZA Integrative Orthologycell wallAT5G22650

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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No InterPro domains detected for this gene.
Mapman id Description
27.3.55RNA.regulation of transcription.HDA
No SignalP domains detected for this gene.