PLAZA 3.0 Dicots gene overview : VV07G13530

Gene: VV07G13530 (Vitis vinifera)

Overview

Gene Identifier: VV07G13530
Transcript Identifier: VV07G13530.1
Gene Type: Coding gene
Location: chr7 : 13664773-13671784 : negative

Family

Gene family: HOM03D001051
(143 genes in 31 species)
specific family
Subfamily: ORTHO03D005692
(33 genes in 26 species)
specific family

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Descriptions

Description (AnnoMine): Methionine--tRNA ligase

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	GSVIVG01038361001

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006431	IEA	InterPro	methionyl-tRNA aminoacylation
GO:0006418	IEA	InterPro	tRNA aminoacylation for protein translation
GO:0046686	ISO	PLAZA Integrative Orthology	response to cadmium ion	AT4G13780

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0000049	IEA	InterPro	tRNA binding
GO:0000166	IEA	InterPro	nucleotide binding
GO:0004825	IEA	InterPro	methionine-tRNA ligase activity
GO:0005524	IEA	InterPro	ATP binding
GO:0004812	IEA	InterPro	aminoacyl-tRNA ligase activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	IEA	InterPro	cytoplasm
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT4G13780

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR014758	Methionyl-tRNA synthetase
IPR002547	tRNA-binding domain
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
IPR015413	Methionyl/Leucyl tRNA synthetase
IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site
IPR012340	Nucleic acid-binding, OB-fold
IPR009080	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR023458	Methionine-tRNA ligase, type 1

Mapman id	Description
29.1.10	protein.aa activation.methionine-tRNA ligase

No SignalP domains detected for this gene.