Gene: VV05G02950 (Vitis vinifera)

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Gene Identifier
VV05G02950
Transcript Identifier
VV05G02950.1
Gene Type
Coding gene
Location
chr5 : 3031717-3046213 : negative

Family

Gene family
HOM03D000287
(398 genes in 31 species)
specific family
Subfamily
ORTHO03D000900
(63 genes in 27 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Putative cullin-like protein 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidGSVIVG01017738001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511IEAInterProubiquitin-dependent protein catabolic process
GO:0048366ISOPLAZA Integrative Orthologyleaf developmentAT4G02570
GO:0010087ISOPLAZA Integrative Orthologyphloem or xylem histogenesisAT4G02570
GO:0042752ISOPLAZA Integrative Orthologyregulation of circadian rhythmAT4G02570
GO:0010265ISOPLAZA Integrative OrthologySCF complex assemblyAT4G02570
GO:0009753ISOPLAZA Integrative Orthologyresponse to jasmonic acidAT4G02570
GO:0009867ISOPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT4G02570
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinAT4G02570
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT4G02570
GO:0044265IEAPLAZA Homologycellular macromolecule catabolic processHOM03D000287
GO:1901575IEAPLAZA Homologyorganic substance catabolic processHOM03D000287
GO:0030163IEAPLAZA Homologyprotein catabolic processHOM03D000287
GO:0051603IEAPLAZA Homologyproteolysis involved in cellular protein catabolic processHOM03D000287
GO:0019941IEAPLAZA Homologymodification-dependent protein catabolic processHOM03D000287
GO:0006508IEAPLAZA HomologyproteolysisHOM03D000287
GO:0044257IEAPLAZA Homologycellular protein catabolic processHOM03D000287
GO:0009056IEAPLAZA Homologycatabolic processHOM03D000287
GO:0009057IEAPLAZA Homologymacromolecule catabolic processHOM03D000287
GO:0043632IEAPLAZA Homologymodification-dependent macromolecule catabolic processHOM03D000287
GO:0044248IEAPLAZA Homologycellular catabolic processHOM03D000287
GO:0044267IEAPLAZA Homologycellular protein metabolic processHOM03D000287
GO:0019538IEAPLAZA Homologyprotein metabolic processHOM03D000287

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0031625IEAInterProubiquitin protein ligase binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT4G02570 AT1G02980
GO:0044389IEAPLAZA Homologysmall conjugating protein ligase bindingHOM03D000287
GO:0019899IEAPLAZA Homologyenzyme bindingHOM03D000287

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031461IEAInterProcullin-RING ubiquitin ligase complex
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G02570
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT4G02570
GO:0000794ISOPLAZA Integrative Orthologycondensed nuclear chromosomeAT4G02570
GO:0009524ISOPLAZA Integrative OrthologyphragmoplastAT4G02570
GO:0005819ISOPLAZA Integrative OrthologyspindleAT4G02570
GO:0005634ISOPLAZA Integrative OrthologynucleusAT4G02570
GO:0000151ISOPLAZA Integrative Orthologyubiquitin ligase complexAT4G02570
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT1G02980
GO:0005622IEAPLAZA HomologyintracellularHOM03D000287
GO:0032991IEAPLAZA Homologymacromolecular complexHOM03D000287
GO:1902494IEAPLAZA Homologycatalytic complexHOM03D000287
GO:0043234IEAPLAZA Homologyprotein complexHOM03D000287
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000287

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR016158Cullin homology
IPR016157Cullin, conserved site
IPR019559Cullin protein, neddylation domain
IPR001373Cullin, N-terminal
IPR016159Cullin repeat-like-containing domain

Mapman id Description
29.5.11.4.3.3protein.degradation.ubiquitin.E3.SCF.cullin
No SignalP domains detected for this gene.