PLAZA 3.0 Dicots gene overview : TP6G28330

Gene: TP6G28330 (Thellungiella parvula)

Overview

Gene Identifier: TP6G28330
Transcript Identifier: TP6G28330.1
Gene Type: Coding gene
Location: ch6-6 : 6563063-6564251 : negative

Family

Gene family: HOM03D000861
(166 genes in 31 species)
specific family
Subfamily: ORTHO03D046458
(3 genes in 3 species)
specific family
Duplication type: Block duplicate

Loading...please wait

Descriptions

Description: similar to AT5G15790|zinc finger (C3HC4-type RING finger) family protein

Description (AnnoMine): protein ligase At3g02290

Identifiers

Identifier	Name
pid	Tp6g28330

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	InterPro	zinc ion binding

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR001841	Zinc finger, RING-type

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.