Gene: TP3G20580 (Thellungiella parvula)

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Gene Identifier
TP3G20580
Transcript Identifier
TP3G20580.1
Gene Type
Coding gene
Location
ch3-1 : 7439697-7442522 : negative

Family

Gene family
HOM03D001735
(95 genes in 30 species)
specific family
Subfamily
ORTHO03D005743
(33 genes in 30 species)
specific family

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Descriptions

Description
similar to AT3G22880|DMC1 (DISRUPTION OF MEIOTIC CONTROL 1)
Description (AnnoMine)
Meiotic recombination protein DMC1 homolog

Identifiers

Identifier Name
pidTp3g20580

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006259IEAInterProDNA metabolic process
GO:0007131IEAInterProreciprocal meiotic recombination
GO:0051321ISOPLAZA Integrative Orthologymeiotic cell cycleOS12G04980 OS11G04954
GO:0006310ISOPLAZA Integrative OrthologyDNA recombinationOS12G04980 OS11G04954
GO:0006281ISOPLAZA Integrative OrthologyDNA repairOS12G04980 OS11G04954
GO:0000707ISOPLAZA Integrative Orthologymeiotic DNA recombinase assemblyOS12G04980 OS11G04954
GO:0000724ISOPLAZA Integrative Orthologydouble-strand break repair via homologous recombinationOS12G04980 OS11G04954
GO:0000733ISOPLAZA Integrative OrthologyDNA strand renaturationOS12G04980 OS11G04954
GO:0007126ISOPLAZA Integrative OrthologymeiosisAT3G22880
GO:0051026ISOPLAZA Integrative Orthologychiasma assemblyAT3G22880

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAInterPronucleotide binding
GO:0005524IEAInterProATP binding
GO:0003677IEAInterProDNA binding
GO:0008094IEAInterProDNA-dependent ATPase activity
GO:0003684ISOPLAZA Integrative Orthologydamaged DNA bindingOS12G04980 OS11G04954
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT3G22880

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR010995DNA repair Rad51/transcription factor NusA, alpha-helical
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR011940Meiotic recombinase Dmc1
IPR013632DNA recombination and repair protein Rad51, C-terminal
IPR020588DNA recombination/repair protein RecA-like, ATP-binding domain
IPR020587DNA recombination/repair protein RecA, monomer-monomer interface

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.