Gene: TP3G04050 (Thellungiella parvula)

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Gene Identifier
TP3G04050
Transcript Identifier
TP3G04050.1
Gene Type
Coding gene
Location
ch3-1 : 1346279-1347481 : positive

Family

Gene family
HOM03D000017
(2380 genes in 31 species)
specific family
Subfamily
ORTHO03D002416
(42 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
similar to AT3G05200|ATL6
Description (AnnoMine)
protein ligase ATL6

Identifiers

Identifier Name
pidTp3g04050

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009816ISOPLAZA Integrative Orthologydefense response to bacterium, incompatible interactionAT3G05200
GO:0010200ISOPLAZA Integrative Orthologyresponse to chitinAT3G05200
GO:0009814ISOPLAZA Integrative Orthologydefense response, incompatible interactionAT3G05200
GO:0016567ISOPLAZA Integrative Orthologyprotein ubiquitinationAT3G05200

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT3G05200
GO:0043169IEAPLAZA Homologycation bindingHOM03D000017
GO:0005488IEAPLAZA HomologybindingHOM03D000017
GO:0043167IEAPLAZA Homologyion bindingHOM03D000017
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000017
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000017

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT3G05200

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR001841Zinc finger, RING-type

No MapMan annotations defined for this gene.
SignalP Description
SignalP-TMSignal Peptide detected using TM network