Gene: TC0001G00190 (Theobroma cacao)
Overview 
- Gene Identifier
- TC0001G00190
- Transcript Identifier
- TC0001G00190.1
- Gene Type
- Coding gene
- Location
- scaffold_1 : 98810-100055 : positive
Family
- Gene family
Descriptions
No default description found ...Description of best ortholog(s):

Identifiers
Identifier | Name |
---|
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0055114 | IEA | Genome Project | oxidation-reduction process | |
GO:0046686 | ISO | PLAZA Tree-based Orthology | response to cadmium ion | AT2G17420 |
GO:0048316 | ISO | PLAZA Tree-based Orthology | seed development | AT4G35460 AT2G17420 |
GO:0045454 | ISO | PLAZA Tree-based Orthology | cell redox homeostasis | AT4G35460 AT2G17420 |
GO:0042964 | ISO | PLAZA Tree-based Orthology | thioredoxin biosynthetic process | AT4G35460 AT2G17420 |
GO:0016049 | ISO | PLAZA Tree-based Orthology | cell growth | AT4G35460 AT2G17420 |
GO:0009846 | ISO | PLAZA Tree-based Orthology | pollen germination | AT4G35460 AT2G17420 |
GO:0019430 | IEA | PLAZA Homology | removal of superoxide radicals | HOM03D001568 |
GO:0071451 | IEA | PLAZA Homology | cellular response to superoxide | HOM03D001568 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0016491 | IEA | Genome Project | oxidoreductase activity | |
GO:0050660 | IEA | Genome Project | flavin adenine dinucleotide binding | |
GO:0004791 | ISO | PLAZA Tree-based Orthology | thioredoxin-disulfide reductase activity | AT4G35460 AT2G17420 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005759 | ISO | PLAZA Tree-based Orthology | mitochondrial matrix | AT2G17420 |
GO:0005829 | ISO | PLAZA Tree-based Orthology | cytosol | AT4G35460 AT2G17420 |
GO:0009941 | ISO | PLAZA Tree-based Orthology | chloroplast envelope | AT4G35460 |
GO:0005737 | IEA | PLAZA Homology | cytoplasm | HOM03D001568 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
InterPro | Description |
---|---|
IPR000103 | Pyridine nucleotide-disulphide oxidoreductase, class-II |
IPR013027 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
IPR008255 | Pyridine nucleotide-disulphide oxidoreductase, class-II, active site |
IPR001327 | Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain |
IPR023753 | Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.