Gene: ST12G031220 (Solanum tuberosum)

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Gene Identifier
ST12G031220
Transcript Identifier
ST12G031220.1
Gene Type
Coding gene
Location
chr12 : 67075103-67079734 : negative

Family

Gene family
HOM03D001754
(94 genes in 30 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description
ATP citrate lyase (AHRD V1 **** Q9AXR6_CAPAN); contains Interpro domain(s) IPR016141 Citrate synthase-like, core
Description (AnnoMine)
ATP-citrate synthase beta chain protein 1

Identifiers

Identifier Name
GeneNamegene:Sotub12g031220
pidSotub12g031220.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0044262IEAInterProcellular carbohydrate metabolic process
GO:0008152IEAInterPrometabolic process
GO:0006085ISOPLAZA Integrative Orthologyacetyl-CoA biosynthetic processAT3G06650 AT5G49460

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046912IEAInterProtransferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
GO:0003878IEAInterProATP citrate synthase activity
GO:0004775IEAInterProsuccinate-CoA ligase (ADP-forming) activity
GO:0003824IEAInterProcatalytic activity
GO:0004774IEAPLAZA Homologysuccinate-CoA ligase activityHOM03D001754

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020ISOPLAZA Integrative OrthologymembraneAT3G06650
GO:0005829ISOPLAZA Integrative OrthologycytosolAT3G06650 AT5G49460
GO:0009346ISOPLAZA Integrative Orthologycitrate lyase complexAT5G49460
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G49460

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005811ATP-citrate lyase/succinyl-CoA ligase
IPR002020Citrate synthase-like
IPR017440ATP-citrate lyase/succinyl-CoA ligase, active site
IPR016143Citrate synthase-like, small alpha subdomain
IPR016102Succinyl-CoA synthetase-like
IPR017866Succinyl-CoA synthetase, beta subunit, conserved site
IPR016141Citrate synthase-like, core
IPR016142Citrate synthase-like, large alpha subdomain
IPR016040NAD(P)-binding domain
IPR005810Succinyl-CoA ligase, alpha subunit

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.