Gene: ST07G028440 (Solanum tuberosum)

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Gene Identifier
ST07G028440
Transcript Identifier
ST07G028440.1
Gene Type
Coding gene
Location
chr07 : 52707008-52712095 : positive

Family

Gene family
HOM03D001146
(134 genes in 31 species)
specific family
Subfamily
ORTHO03D008888
(29 genes in 27 species)
specific family

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Descriptions

Description
DNA topoisomerase (ATP-hydrolyzing) (AHRD V1 **** A7HE24_ANADF); contains Interpro domain(s) IPR002815 Spo11/DNA topoisomerase VI, subunit A
Description (AnnoMine)
Meiotic recombination protein SPO11-1

Identifiers

Identifier Name
GeneNamegene:Sotub07g028440
pidSotub07g028440.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006259IEAInterProDNA metabolic process
GO:0051026ISOPLAZA Integrative Orthologychiasma assemblyAT3G13170
GO:0042138ISOPLAZA Integrative Orthologymeiotic DNA double-strand break formationAT3G13170
GO:0000706ISOPLAZA Integrative Orthologymeiotic DNA double-strand break processingAT3G13170
GO:0034090ISOPLAZA Integrative Orthologymaintenance of meiotic sister chromatid cohesionAT3G13170
GO:0007129ISOPLAZA Integrative OrthologysynapsisAT3G13170
GO:0007131ISOPLAZA Integrative Orthologyreciprocal meiotic recombinationAT3G13170

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAInterProcatalytic activity
GO:0005524IEAInterProATP binding
GO:0003677IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005694IEAInterProchromosome
GO:0005634ISOPLAZA Integrative OrthologynucleusAT3G13170

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002815Spo11/DNA topoisomerase VI, subunit A
IPR013049Spo11/DNA topoisomerase VI, subunit A, N-terminal
IPR011991Winged helix-turn-helix DNA-binding domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.