Gene: ST02G028990 (Solanum tuberosum)

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Gene Identifier
ST02G028990
Transcript Identifier
ST02G028990.1
Gene Type
Coding gene
Location
chr02 : 62458621-62463324 : negative

Family

Gene family
HOM03D001128
(137 genes in 31 species)
specific family
Subfamily
ORTHO03D001483
(50 genes in 26 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
UV excision repair protein RAD23 (AHRD V1 **-- B6JX15_SCHJY); contains Interpro domain(s) IPR004806 UV excision repair protein Rad23
Description (AnnoMine)
Probable ubiquitin receptor RAD23

Identifiers

Identifier Name
GeneNamegene:Sotub02g028990
pidSotub02g028990.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0043161IEAInterProproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0006289IEAInterPronucleotide-excision repair
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT5G38470
GO:0010498IEAPLAZA Homologyproteasomal protein catabolic processHOM03D001128

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0003684IEAInterProdamaged DNA binding
GO:0031593ISOPLAZA Integrative Orthologypolyubiquitin bindingAT5G38470 AT3G02540
GO:0070628ISOPLAZA Integrative Orthologyproteasome bindingAT5G38470 AT3G02540
GO:0043130ISOPLAZA Integrative Orthologyubiquitin bindingAT5G38470 AT3G02540

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G38470
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT3G02540

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015940Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR015360XPC-binding domain
IPR004806UV excision repair protein Rad23
IPR009060UBA-like
IPR006636Heat shock chaperonin-binding
IPR000449Ubiquitin-associated domain/translation elongation factor EF-Ts, N-terminal
IPR000626Ubiquitin domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.