Gene: ST01G040070 (Solanum tuberosum)

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Gene Identifier
ST01G040070
Transcript Identifier
ST01G040070.1
Gene Type
Coding gene
Location
chr01 : 88544871-88552467 : negative

Family

Gene family
HOM03D000836
(170 genes in 30 species)
specific family
Subfamily
ORTHO03D000966
(61 genes in 30 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
ATP-dependent RNA helicase DOB1 (AHRD V1 **** B0WF10_CULQU); contains Interpro domain(s) IPR016438 RNA helicase, ATP-dependent, SK12/DOB1
Description (AnnoMine)
viralicidic activity 2-like 2

Identifiers

Identifier Name
GeneNamegene:Sotub01g040070
pidSotub01g040070.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0031125ISOPLAZA Integrative OrthologyrRNA 3'-end processingAT1G59760
GO:0006364ISOPLAZA Integrative OrthologyrRNA processingAT1G59760

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008026IEAInterProATP-dependent helicase activity
GO:0004386IEAInterProhelicase activity
GO:0016818IEAInterProhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676IEAInterPronucleic acid binding
GO:0005524IEAInterProATP binding
GO:0070035IEAPLAZA Homologypurine NTP-dependent helicase activityHOM03D000836

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G59760

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR012961DSH, C-terminal
IPR001650Helicase, C-terminal
IPR025696rRNA-processing arch domain
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.