Gene: ST01G039200 (Solanum tuberosum)

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Gene Identifier
ST01G039200
Transcript Identifier
ST01G039200.1
Gene Type
Coding gene
Location
chr01 : 87711229-87715261 : positive

Family

Gene family
HOM03D000046
(1586 genes in 29 species)
specific family
Subfamily
ORTHO03D003963
(36 genes in 25 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
BHLH transcription factor (AHRD V1 *-*- B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Description (AnnoMine)
Transcription factor PIF3

Identifiers

Identifier Name
GeneNamegene:Sotub01g039200
pidSotub01g039200.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009704ISOPLAZA Tree-based Orthologyde-etiolationAT1G09530
GO:0009740ISOPLAZA Tree-based Orthologygibberellic acid mediated signaling pathwayAT1G09530
GO:0031539ISOPLAZA Tree-based Orthologypositive regulation of anthocyanin metabolic processAT1G09530
GO:0006355ISOPLAZA Tree-based Orthologyregulation of transcription, DNA-dependentAT1G09530
GO:0010017ISOPLAZA Tree-based Orthologyred or far-red light signaling pathwayAT1G09530

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983IEAInterProprotein dimerization activity
GO:0003677ISOPLAZA Tree-based OrthologyDNA bindingAT1G09530
GO:0042802ISOPLAZA Tree-based Orthologyidentical protein bindingAT1G09530
GO:0005515IEAPLAZA Homologyprotein bindingHOM03D000046
GO:0005488IEAPLAZA HomologybindingHOM03D000046

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Tree-based OrthologynucleusAT1G09530

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBbHLH