Gene: SL12G009240 (Solanum lycopersicum)

Overview top

Gene Identifier
SL12G009240
Transcript Identifier
SL12G009240.1
Gene Type
Coding gene
Location
ch12 : 2519864-2520610 : negative

Family

Gene family
HOM03D000089
(1046 genes in 29 species)
specific family
Subfamily
ORTHO03D004396
(35 genes in 24 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Ethylene-responsive transcription factor 4 (AHRD V1 *-*- ERF78_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding
Description (AnnoMine)
Ethylene-responsive transcription factor

Identifiers

Identifier Name
pidSolyc12g009240.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03D000089
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000089
GO:0010467IEAPLAZA Homologygene expressionHOM03D000089
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000089
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000089
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000089
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000089
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03D000089
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000089
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03D000089
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03D000089
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000089
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03D000089
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03D000089
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000089
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03D000089
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000089
GO:0009987IEAPLAZA Homologycellular processHOM03D000089
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03D000089
GO:0065007IEAPLAZA Homologybiological regulationHOM03D000089
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000089
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03D000089
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000089
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03D000089
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03D000089
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03D000089
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000089
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000089
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000089
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000089
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03D000089
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03D000089
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03D000089
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000089
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000089
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000089
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03D000089
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000089
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03D000089
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000089
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03D000089
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000089
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000089
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03D000089

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0003700IEAInterProsequence-specific DNA binding transcription factor activity
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000089
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000089
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000089
GO:0005488IEAPLAZA HomologybindingHOM03D000089
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03D000089

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005840IEAGenome Projectribosome

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001471AP2/ERF domain
IPR016177DNA-binding domain

Mapman id Description
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBERF