Gene: SL12G009170 (Solanum lycopersicum)

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Gene Identifier
SL12G009170
Transcript Identifier
SL12G009170.1
Gene Type
Coding gene
Location
ch12 : 2474924-2475601 : positive

Family

Gene family
HOM03D002967
(61 genes in 31 species)
specific family
Subfamily
ORTHO03D078025
(2 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Small nuclear ribonucleoprotein LSM1 (AHRD V1 ***- B6SKB6_MAIZE)%3B contains Interpro domain(s) IPR001163 Like-Sm ribonucleoprotein%2C core
Description (AnnoMine)
U6 snRNA-associated Sm-like protein LSm1

Identifiers

Identifier Name
pidSolyc12g009170.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016070ISOPLAZA Tree-based OrthologyRNA metabolic processAT3G14080

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000339IEAGenome ProjectRNA cap binding
GO:0005515IEAGenome Projectprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000932ISOPLAZA Tree-based Orthologycytoplasmic mRNA processing bodyAT3G14080
GO:0005732IEAPLAZA Homologysmall nucleolar ribonucleoprotein complexHOM03D002967

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR010920Like-Sm (LSM) domain

Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.