Gene: SL12G008320 (Solanum lycopersicum)
Overview 
- Gene Identifier
- SL12G008320
- Transcript Identifier
- SL12G008320.1
- Gene Type
- Coding gene
- Location
- ch12 : 1732691-1736090 : positive
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
- Description
-
Solute carrier family 2%2C facilitated glucose transporter member 3 (AHRD V1 ***- GTR3_CHICK)%3B contains Interpro domain(s) IPR003663 Sugar/inositol transporter
- Description (AnnoMine)
-
Hexose carrier protein HEX6
Identifiers
Identifier | Name |
---|---|
pid | Solyc12g008320.1.1 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0006810 | IEA | InterPro | transport | |
GO:0055085 | IEA | InterPro | transmembrane transport | |
GO:0044765 | IEA | PLAZA Homology | single-organism transport | HOM03D000054 |
GO:0009987 | IEA | PLAZA Homology | cellular process | HOM03D000054 |
GO:0044699 | IEA | PLAZA Homology | single-organism process | HOM03D000054 |
GO:0044763 | IEA | PLAZA Homology | single-organism cellular process | HOM03D000054 |
GO:0051234 | IEA | PLAZA Homology | establishment of localization | HOM03D000054 |
GO:0051179 | IEA | PLAZA Homology | localization | HOM03D000054 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005215 | IEA | InterPro | transporter activity | |
GO:0022891 | IEA | InterPro | substrate-specific transmembrane transporter activity | |
GO:0022857 | IEA | InterPro | transmembrane transporter activity | |
GO:0022892 | IEA | PLAZA Homology | substrate-specific transporter activity | HOM03D000054 |
GO:0005354 | ISO | PLAZA Integrative Orthology | galactose transmembrane transporter activity | AT1G77210 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0016020 | IEA | Genome Project | membrane | |
GO:0016021 | IEA | Genome Project | integral to membrane | |
GO:0031224 | IEA | PLAZA Homology | intrinsic to membrane | HOM03D000054 |
GO:0044425 | IEA | PLAZA Homology | membrane part | HOM03D000054 |
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G77210 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
34.2 | transport.sugars |
No SignalP domains detected for this gene.