Gene: SL12G006230 (Solanum lycopersicum)

Overview top

Gene Identifier
SL12G006230
Transcript Identifier
SL12G006230.1
Gene Type
Coding gene
Location
ch12 : 745631-745882 : negative

Family

Gene family
HOM03D000334
(353 genes in 30 species)
specific family
Subfamily
ORTHO03D070283
(2 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
RING-H2 finger protein (AHRD V1 ***- Q30D22_PONTR)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type
Description (AnnoMine)
H2 zinc finger protein RHA1a

Identifiers

Identifier Name
pidSolyc12g006230.1.1

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAGenome Projectzinc ion binding
GO:0005515IEAInterProprotein binding
GO:0043169IEAPLAZA Homologycation bindingHOM03D000334
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000334
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000334

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.