Gene: SL12G005630 (Solanum lycopersicum)

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Gene Identifier
SL12G005630
Transcript Identifier
SL12G005630.1
Gene Type
Coding gene
Location
ch12 : 334079-336443 : negative

Family

Gene family
HOM03D004274
(45 genes in 31 species)
specific family

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Descriptions

Description
Cytochrome b6-f complex iron-sulfur subunit (AHRD V1 ***- A9PEX3_POPTR)%3B contains Interpro domain(s) IPR005805 Rieske iron-sulphur protein%2C C-terminal
Description (AnnoMine)
complex iron-sulfur subunit

Identifiers

Identifier Name
pidSolyc12g005630.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0015979IEAInterProphotosynthesis
GO:0080167ISOPLAZA Integrative Orthologyresponse to karrikinAT4G03280
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT4G03280
GO:0009767ISOPLAZA Integrative Orthologyphotosynthetic electron transport chainAT4G03280
GO:0010196ISOPLAZA Integrative Orthologynonphotochemical quenchingAT4G03280

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0031177IEAGenome Projectphosphopantetheine binding
GO:0009496IEAInterProplastoquinol--plastocyanin reductase activity
GO:0008121IEAInterProubiquinol-cytochrome-c reductase activity
GO:0051537IEAInterPro2 iron, 2 sulfur cluster binding
GO:0016679IEAInterProoxidoreductase activity, acting on diphenols and related substances as donors
GO:0016491IEAInterProoxidoreductase activity
GO:0045158IEAInterProelectron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT4G03280
GO:0046028ISOPLAZA Integrative Orthologyelectron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activityAT4G03280
GO:0052880IEAPLAZA Homologyoxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptorHOM03D004274
GO:0016681IEAPLAZA Homologyoxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptorHOM03D004274

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAGenome Projectmembrane
GO:0042651IEAGenome Projectthylakoid membrane
GO:0009534ISOPLAZA Integrative Orthologychloroplast thylakoidAT4G03280
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT4G03280
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT4G03280
GO:0009579ISOPLAZA Integrative OrthologythylakoidAT4G03280
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT4G03280
GO:0009535ISOPLAZA Integrative Orthologychloroplast thylakoid membraneAT4G03280
GO:0009512ISOPLAZA Integrative Orthologycytochrome b6f complexAT4G03280

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005805Rieske iron-sulphur protein, C-terminal
IPR014349Rieske iron-sulphur protein
IPR017941Rieske [2Fe-2S] iron-sulphur domain
IPR014909Cytochrome b6-f complex Fe-S subunit
IPR023960Cytochrome b6-f complex iron-sulfur subunit

Mapman id Description
1.1.3.1PS.lightreaction.cytochrome b6/f.iron sulfur subunit
No SignalP domains detected for this gene.