Gene: SL10G080740 (Solanum lycopersicum)

Overview top

Gene Identifier
SL10G080740
Transcript Identifier
SL10G080740.1
Gene Type
Coding gene
Location
ch10 : 61271723-61276562 : positive

Family

Gene family
HOM03D001885
(90 genes in 29 species)
specific family
Subfamily
ORTHO03D001683
(47 genes in 28 species)
specific family

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Descriptions

Description
Smg-7 homolog nonsense mediated mRNA decay factor (C. elegans) (Fragment) (AHRD V1 *--- B1ALB4_HUMAN)%3B contains Interpro domain(s) IPR019458 Telomerase activating protein Est1
Description (AnnoMine)
Protein SMG7

Identifiers

Identifier Name
pidSolyc10g080740.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007126ISOPLAZA Integrative OrthologymeiosisAT5G19400
GO:0090306ISOPLAZA Integrative Orthologyspindle assembly involved in meiosisAT5G19400
GO:0000184ISOPLAZA Integrative Orthologynuclear-transcribed mRNA catabolic process, nonsense-mediated decayAT5G19400

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAPLAZA Homologyprotein bindingHOM03D001885

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G19400
GO:0000932ISOPLAZA Integrative Orthologycytoplasmic mRNA processing bodyAT5G19400

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR019458Telomerase activating protein Est1
IPR018834DNA/RNA-binding domain, Est1-type

Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.