Gene: SL10G076610 (Solanum lycopersicum)

Overview top

Gene Identifier
SL10G076610
Transcript Identifier
SL10G076610.1
Gene Type
Coding gene
Location
ch10 : 58891629-58895117 : negative

Family

Gene family
HOM03D001316
(118 genes in 31 species)
specific family
Subfamily
ORTHO03D001693
(47 genes in 27 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Lysyl-tRNA synthetase (AHRD V1 ***- B9SY11_RICCO)%3B contains Interpro domain(s) IPR002313 Lysyl-tRNA synthetase%2C class II
Description
Lysine--tRNA ligase
Description (AnnoMine)
Lysine--tRNA ligase

Identifiers

Identifier Name
pidSolyc10g076610.1.1
uniprotQ43776

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006430IEAUniProtlysyl-tRNA aminoacylation1
GO:0006418IEAInterProtRNA aminoacylation for protein translation
GO:0010388IEAUniProtcullin deneddylation1
GO:0000085IEAUniProtmitotic G2 phase1
GO:0009165IEAUniProtnucleotide biosynthetic process1
GO:0009640IEAUniProtphotomorphogenesis1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEAGenome Projectnucleic acid binding1
GO:0000166IEAInterPronucleotide binding
GO:0004824IEAUniProtlysine-tRNA ligase activity1
GO:0005524IEAUniProtATP binding1
GO:0004812IEAInterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0005829IEAUniProtcytosol1
GO:0009506IEAUniProtplasmodesma1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006195Aminoacyl-tRNA synthetase, class II
IPR002313Lysine-tRNA ligase, class II
IPR012340Nucleic acid-binding, OB-fold
IPR018149Lysyl-tRNA synthetase, class II, C-terminal
IPR018150Aminoacyl-tRNA synthetase, class II (D/K/N)-like
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

Mapman id Description
29.1.6protein.aa activation.lysine-tRNA ligase
No SignalP domains detected for this gene.