Gene: SL09G063010 (Solanum lycopersicum)

Overview top

Gene Identifier
SL09G063010
Transcript Identifier
SL09G063010.1
Gene Type
Coding gene
Location
ch09 : 56525973-56535743 : negative

Family

Gene family
HOM03D000046
(1586 genes in 29 species)
specific family
Subfamily
ORTHO03D006694
(32 genes in 24 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Description (AnnoMine)
Putative transcription factor bHLH056

Identifiers

Identifier Name
pidSolyc09g063010.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0006783ISOPLAZA Tree-based Orthologyheme biosynthetic processAT2G20180
GO:0010161ISOPLAZA Tree-based Orthologyred light signaling pathwayAT2G20180
GO:0010100ISOPLAZA Tree-based Orthologynegative regulation of photomorphogenesisAT2G20180
GO:0009740ISOPLAZA Tree-based Orthologygibberellic acid mediated signaling pathwayAT2G20180
GO:0009959ISOPLAZA Tree-based Orthologynegative gravitropismAT2G20180
GO:0010187ISOPLAZA Tree-based Orthologynegative regulation of seed germinationAT2G20180
GO:0015995ISOPLAZA Tree-based Orthologychlorophyll biosynthetic processAT2G20180

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700IEAGenome Projectsequence-specific DNA binding transcription factor activity
GO:0010313IEAGenome Projectphytochrome binding
GO:0046983IEAInterProprotein dimerization activity
GO:0042802ISOPLAZA Tree-based Orthologyidentical protein bindingAT2G20180
GO:0003677ISOPLAZA Tree-based OrthologyDNA bindingAT2G20180
GO:0005515IEAPLAZA Homologyprotein bindingHOM03D000046
GO:0005488IEAPLAZA HomologybindingHOM03D000046

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBbHLH