Gene: SL08G074590 (Solanum lycopersicum)

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Gene Identifier
SL08G074590
Transcript Identifier
SL08G074590.1
Gene Type
Coding gene
Location
ch08 : 55854463-55859299 : negative

Family

Gene family
HOM03D003484
(52 genes in 31 species)
specific family
Subfamily
ORTHO03D003767
(37 genes in 31 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
tRNA 2-thiocytidine biosynthesis protein TtcA (AHRD V1 **** TTCA_MYXXD)%3B contains Interpro domain(s) IPR012089 2-thiocytidine tRNA biosynthesis protein%2C TtcA
Description (AnnoMine)
Cytoplasmic tRNA 2-thiolation protein 1

Identifiers

Identifier Name
pidSolyc08g074590.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008033IEAGenome ProjecttRNA processing
GO:0000302ISOPLAZA Integrative Orthologyresponse to reactive oxygen speciesAT2G44270
GO:0080157ISOPLAZA Integrative Orthologyregulation of plant-type cell wall organization or biogenesisAT2G44270
GO:0034227IEAPLAZA HomologytRNA thio-modificationHOM03D003484

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000049IEAGenome ProjecttRNA binding
GO:0005515IEAGenome Projectprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAPLAZA HomologycytoplasmHOM03D003484

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011063tRNA(Ile)-lysidine/2-thiocytidine synthase
IPR014729Rossmann-like alpha/beta/alpha sandwich fold

Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.