Gene: SL07G008050 (Solanum lycopersicum)

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Gene Identifier
SL07G008050
Transcript Identifier
SL07G008050.1
Gene Type
Coding gene
Location
ch07 : 2762791-2767317 : negative

Family

Gene family
HOM03D001254
(123 genes in 31 species)
specific family
Subfamily
ORTHO03D002288
(42 genes in 28 species)
specific family

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Descriptions

Description
RING finger protein (AHRD V1 **-- B6JVU3_SCHJY)%3B contains Interpro domain(s) IPR001607 Zinc finger%2C UBP-type
Description (AnnoMine)
Uncharacterized RING finger protein EEED8.16

Identifiers

Identifier Name
pidSolyc07g008050.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010029ISOPLAZA Integrative Orthologyregulation of seed germinationAT2G42160

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAGenome Projectzinc ion binding
GO:0008139IEAGenome Projectnuclear localization sequence binding
GO:0042802IEAGenome Projectidentical protein binding
GO:0005515IEAInterProprotein binding
GO:0046982ISOPLAZA Integrative Orthologyprotein heterodimerization activityAT2G42160
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT2G42160

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000151ISOPLAZA Integrative Orthologyubiquitin ligase complexAT2G42160

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001607Zinc finger, UBP-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR001841Zinc finger, RING-type
IPR011422BRCA1-associated 2

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.