Gene: SL06G008200 (Solanum lycopersicum)

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Gene Identifier
SL06G008200
Transcript Identifier
SL06G008200.1
Gene Type
Coding gene
Location
ch06 : 2083395-2088046 : positive

Family

Gene family
HOM03D000096
(1015 genes in 31 species)
specific family
Subfamily
ORTHO03D004719
(35 genes in 27 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
MYB-CC type transfactor (AHRD V1 *--- B4F7W7_MAIZE)%3B contains Interpro domain(s) IPR006447 Myb-like DNA-binding region%2C SHAQKYF class
Description (AnnoMine)
PHR1-LIKE 1

Identifiers

Identifier Name
pidSolyc06g008200.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0071486ISOPLAZA Tree-based Orthologycellular response to high light intensityAT4G28610
GO:0007623ISOPLAZA Tree-based Orthologycircadian rhythmAT4G28610
GO:0055063ISOPLAZA Tree-based Orthologysulfate ion homeostasisAT4G28610
GO:0016036ISOPLAZA Tree-based Orthologycellular response to phosphate starvationAT4G28610

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003682IEAInterProchromatin binding
GO:0003677IEAInterProDNA binding
GO:0005488IEAPLAZA HomologybindingHOM03D000096
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000096
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000096
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000096

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Tree-based OrthologynucleusAT4G28610

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006447Myb domain, plants
IPR001005SANT/Myb domain
IPR009057Homeodomain-like
IPR017930Myb domain
IPR025756MYB-CC type transcription factor, LHEQLE-containing domain

Mapman id Description
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBG2-like