Gene: SL05G056250 (Solanum lycopersicum)

Overview top

Gene Identifier
SL05G056250
Transcript Identifier
SL05G056250.1
Gene Type
Coding gene
Location
ch05 : 64749102-64755215 : negative

Family

Gene family
HOM03D002360
(75 genes in 31 species)
specific family

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Descriptions

Description
Asparaginyl-tRNA synthetase (AHRD V1 **** SYN_PYRHO)%3B contains Interpro domain(s) IPR004523 Aspartyl-tRNA synthetase%2C class IIb%2C archea/euk type
Description (AnnoMine)
Aspartate--tRNA ligase, cytoplasmic

Identifiers

Identifier Name
pidSolyc05g056250.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006422IEAInterProaspartyl-tRNA aminoacylation
GO:0006418IEAInterProtRNA aminoacylation for protein translation
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT4G31180 AT4G26870

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEAGenome Projectnucleic acid binding
GO:0004815IEAGenome Projectaspartate-tRNA ligase activity
GO:0042802IEAGenome Projectidentical protein binding
GO:0000166IEAInterPronucleotide binding
GO:0005524IEAInterProATP binding
GO:0004812IEAInterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G31180 AT4G26870
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT4G26870

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002312Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004523Aspartyl-tRNA synthetases
IPR006195Aminoacyl-tRNA synthetase, class II
IPR018150Aminoacyl-tRNA synthetase, class II (D/K/N)-like
IPR012340Nucleic acid-binding, OB-fold
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

Mapman id Description
29.1.12protein.aa activation.aspartate-tRNA ligase
No SignalP domains detected for this gene.