Gene: SL05G018310 (Solanum lycopersicum)

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Gene Identifier
SL05G018310
Transcript Identifier
SL05G018310.1
Gene Type
Coding gene
Location
ch05 : 20435653-20436627 : negative

Family

Gene family
HOM03D000017
(2380 genes in 31 species)
specific family
Subfamily
ORTHO03D072915
(2 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type
Description (AnnoMine)
Putative RING-H2 finger protein ATL12

Identifiers

Identifier Name
pidSolyc05g018310.1.1

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAGenome Projectzinc ion binding
GO:0004842IEAGenome Projectubiquitin-protein ligase activity
GO:0005515IEAInterProprotein binding
GO:0043169IEAPLAZA Homologycation bindingHOM03D000017
GO:0005488IEAPLAZA HomologybindingHOM03D000017
GO:0043167IEAPLAZA Homologyion bindingHOM03D000017
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000017
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000017

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021IEAGenome Projectintegral to membrane

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
SignalP Description
SignalP-TMSignal Peptide detected using TM network