Gene: SL04G054200 (Solanum lycopersicum)

Overview top

Gene Identifier
SL04G054200
Transcript Identifier
SL04G054200.1
Gene Type
Coding gene
Location
ch04 : 51083644-51089596 : positive

Family

Gene family
HOM03D000006
(4746 genes in 31 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Receptor like kinase%2C RLK
Description (AnnoMine)
receptor-like kinase protein THICK TASSEL DWARF1

Identifiers

Identifier Name
pidSolyc04g054200.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006468IEAGenome Projectprotein phosphorylation
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000006
GO:0006796IEAPLAZA Homologyphosphate-containing compound metabolic processHOM03D000006
GO:0006793IEAPLAZA Homologyphosphorus metabolic processHOM03D000006
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000006
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000006
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000006
GO:0009987IEAPLAZA Homologycellular processHOM03D000006
GO:0016310IEAPLAZA HomologyphosphorylationHOM03D000006
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000006
GO:0043412IEAPLAZA Homologymacromolecule modificationHOM03D000006
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000006
GO:0044267IEAPLAZA Homologycellular protein metabolic processHOM03D000006
GO:0006464IEAPLAZA Homologycellular protein modification processHOM03D000006
GO:0036211IEAPLAZA Homologyprotein modification processHOM03D000006
GO:0019538IEAPLAZA Homologyprotein metabolic processHOM03D000006

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAGenome Projectprotein binding
GO:0004675IEAGenome Projecttransmembrane receptor protein serine/threonine kinase activity
GO:0004672IEAInterProprotein kinase activity
GO:0004674IEAInterProprotein serine/threonine kinase activity
GO:0005524IEAInterProATP binding
GO:0016772IEAInterProtransferase activity, transferring phosphorus-containing groups
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000006
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000006
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000006
GO:0043167IEAPLAZA Homologyion bindingHOM03D000006
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000006
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000006
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000006
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000006
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000006
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03D000006
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000006
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000006
GO:0016301IEAPLAZA Homologykinase activityHOM03D000006
GO:0016773IEAPLAZA Homologyphosphotransferase activity, alcohol group as acceptorHOM03D000006
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000006
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000006
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000006
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000006
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000006
GO:0005488IEAPLAZA HomologybindingHOM03D000006
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000006
GO:0016740IEAPLAZA Homologytransferase activityHOM03D000006
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000006

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G10020
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G10020

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003591Leucine-rich repeat, typical subtype
IPR000719Protein kinase domain
IPR002290Serine/threonine- / dual specificity protein kinase, catalytic domain
IPR008271Serine/threonine-protein kinase, active site
IPR001611Leucine-rich repeat
IPR011009Protein kinase-like domain
IPR013210Leucine-rich repeat-containing N-terminal, type 2

Mapman id Description
30.2.11signalling.receptor kinases.leucine rich repeat XI
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network