Gene: SL04G008420 (Solanum lycopersicum)

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Gene Identifier
SL04G008420
Transcript Identifier
SL04G008420.1
Gene Type
Coding gene
Location
ch04 : 2038054-2041138 : positive

Family

Gene family
HOM03D000832
(170 genes in 31 species)
specific family
Subfamily
ORTHO03D017740
(9 genes in 9 species)
specific family

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Descriptions

Description
PHD finger family protein (AHRD V1 **-- D7LPW0_ARALY)%3B contains Interpro domain(s) IPR011011 Zinc finger%2C FYVE/PHD-type
Description (AnnoMine)
finger protein MALE STERILITY 1

Identifiers

Identifier Name
pidSolyc04g008420.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0071367ISOPLAZA Integrative Orthologycellular response to brassinosteroid stimulusAT5G22260
GO:0055046ISOPLAZA Integrative OrthologymicrogametogenesisAT5G22260
GO:0048655ISOPLAZA Integrative Orthologyanther wall tapetum morphogenesisAT5G22260
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT5G22260
GO:0010208ISOPLAZA Integrative Orthologypollen wall assemblyAT5G22260
GO:0009846ISOPLAZA Integrative Orthologypollen germinationAT5G22260

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAGenome Projectzinc ion binding
GO:0003700IEAGenome Projectsequence-specific DNA binding transcription factor activity
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G22260

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR001965Zinc finger, PHD-type
IPR019787Zinc finger, PHD-finger
IPR019786Zinc finger, PHD-type, conserved site
IPR011011Zinc finger, FYVE/PHD-type

Mapman id Description
27.3.67RNA.regulation of transcription.putative transcription regulator
No SignalP domains detected for this gene.