Gene: SL02G084680 (Solanum lycopersicum)

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Gene Identifier
SL02G084680
Transcript Identifier
SL02G084680.1
Gene Type
Coding gene
Location
ch02 : 42356126-42358067 : positive

Family

Gene family
HOM03D000582
(230 genes in 29 species)
specific family
Subfamily
ORTHO03D008224
(30 genes in 24 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Short internodes 2 (AHRD V1 **-- B9MXK1_POPTR)%3B contains Interpro domain(s) IPR007818 Protein of unknown function DUF702
Description (AnnoMine)
SHI RELATED SEQUENCE

Identifiers

Identifier Name
pidSolyc02g084680.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009938ISOPLAZA Integrative Orthologynegative regulation of gibberellic acid mediated signaling pathwayAT5G66350
GO:0009740ISOPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT5G66350
GO:0009739ISOPLAZA Integrative Orthologyresponse to gibberellin stimulusAT5G66350
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT3G51060
GO:0048480ISOPLAZA Integrative Orthologystigma developmentAT3G51060
GO:0010252ISOPLAZA Integrative Orthologyauxin homeostasisAT3G51060
GO:0048479ISOPLAZA Integrative Orthologystyle developmentAT3G51060
GO:0010051ISOPLAZA Integrative Orthologyxylem and phloem pattern formationAT3G51060

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700IEAGenome Projectsequence-specific DNA binding transcription factor activity
GO:0046982IEAGenome Projectprotein heterodimerization activity
GO:0003677ISOPLAZA Integrative OrthologyDNA bindingAT3G51060

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G66350 AT3G51060

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006510Zinc finger, lateral root primordium type 1
IPR007818Protein of unknown function DUF702
IPR006511Lateral Root Primordium type 1, C-terminal

Mapman id Description
27.3.11RNA.regulation of transcription.C2H2 zinc finger family
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network
DatabaseType
PlantTFDBSRS