Gene: SL02G081010 (Solanum lycopersicum)

Overview top

Gene Identifier
SL02G081010
Transcript Identifier
SL02G081010.1
Gene Type
Coding gene
Location
ch02 : 39647766-39651648 : negative

Family

Gene family
HOM03D000451
(280 genes in 30 species)
specific family
Subfamily
ORTHO03D000171
(140 genes in 29 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
Transcription factor jumonji domain-containing protein (AHRD V1 **-* D7KN75_ARALY)%3B contains Interpro domain(s) IPR013129 Transcription factor jumonji
Description (AnnoMine)
Probable JmjC domain-containing histone demethylation protein 2C

Identifiers

Identifier Name
pidSolyc02g081010.1.1

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0080188ISOPLAZA Integrative OrthologyRNA-directed DNA methylationAT3G07610
GO:0070919ISOPLAZA Integrative Orthologyproduction of siRNA involved in chromatin silencing by small RNAAT3G07610
GO:0010468ISOPLAZA Integrative Orthologyregulation of gene expressionAT3G07610
GO:0033169ISOPLAZA Integrative Orthologyhistone H3-K9 demethylationAT3G07610
GO:0048366ISOPLAZA Integrative Orthologyleaf developmentAT3G07610
GO:0032776ISOPLAZA Integrative OrthologyDNA methylation on cytosineAT3G07610
GO:0009908ISOPLAZA Integrative Orthologyflower developmentAT3G07610
GO:0009555ISOPLAZA Integrative Orthologypollen developmentAT3G07610

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAGenome Projectzinc ion binding
GO:0003700IEAGenome Projectsequence-specific DNA binding transcription factor activity
GO:0005515IEAInterProprotein binding
GO:0031490ISOPLAZA Integrative Orthologychromatin DNA bindingAT3G07610
GO:0032454ISOPLAZA Integrative Orthologyhistone demethylase activity (H3-K9 specific)AT3G07610

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003347JmjC domain
IPR001841Zinc finger, RING-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.