PLAZA 3.0 Dicots gene overview : SL02G078370

Gene: SL02G078370 (Solanum lycopersicum)

Overview

Gene Identifier: SL02G078370
Transcript Identifier: SL02G078370.1
Gene Type: Coding gene
Location: ch02 : 37660706-37661650 : positive

Family

Gene family: HOM03D019158
(2 genes in 2 species)
specific family

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Descriptions

Description: Anther-specific protein TA-29 (AHRD V1 ***- TA29_TOBAC)

Identifiers

Identifier	Name
pid	Solyc02g078370.1.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...the gene in Genomeview, a genome browser
...all colinear gene pairs.

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

No InterPro domains detected for this gene.

Mapman id	Description
35.2	not assigned.unknown

SignalP	Description
SignalP-noTM	Signal Peptide detected using noTM network