Gene: SL02G062620 (Solanum lycopersicum)

Overview top

Gene Identifier
SL02G062620
Transcript Identifier
SL02G062620.1
Gene Type
Coding gene
Location
ch02 : 28927918-28943336 : negative

Family

Gene family
HOM03D004760
(42 genes in 31 species)
specific family
Subfamily
ORTHO03D005378
(34 genes in 31 species)
specific family

Loading...please wait

Descriptions

Description
Nuclear cap-binding protein subunit 2 (AHRD V1 **** B6SNB6_MAIZE)%3B contains Interpro domain(s) IPR012677 Nucleotide-binding%2C alpha-beta plait
Description (AnnoMine)
cap-binding protein subunit 2

Identifiers

Identifier Name
pidSolyc02g062620.2.1

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0045292IEAInterPromRNA cis splicing, via spliceosome
GO:0031053ISOPLAZA Integrative Orthologyprimary miRNA processingAT5G44200
GO:0000394ISOPLAZA Integrative OrthologyRNA splicing, via endonucleolytic cleavage and ligationAT5G44200
GO:0016070ISOPLAZA Integrative OrthologyRNA metabolic processAT5G44200

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAGenome Projectnucleotide binding
GO:0003676IEAGenome Projectnucleic acid binding
GO:0000339IEAGenome ProjectRNA cap binding
GO:0005515IEAGenome Projectprotein binding
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D004760

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005846IEAInterPronuclear cap binding complex
GO:0005845ISOPLAZA Integrative OrthologymRNA cap binding complexAT5G44200

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000504RNA recognition motif domain
IPR012677Nucleotide-binding, alpha-beta plait
IPR027157Nuclear cap-binding protein subunit 2

Mapman id Description
27.1.1RNA.processing.splicing
No SignalP domains detected for this gene.