Gene: SL01G112000 (Solanum lycopersicum)
Overview 
- Gene Identifier
- SL01G112000
- Transcript Identifier
- SL01G112000.1
- Gene Type
- Coding gene
- Location
- ch01 : 89896800-89898180 : positive
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
- Description
-
Expansin-like protein (AHRD V1 ***- A7X331_SOLLC)%3B contains Interpro domain(s) IPR007112 Expansin 45%2C endoglucanase-like IPR007117 Pollen allergen/expansin%2C C-terminal
- Description (AnnoMine)
-
Expansin-like A1
Identifiers
Identifier | Name |
---|---|
pid | Solyc01g112000.2.1 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0019953 | IEA | InterPro | sexual reproduction | |
GO:0071669 | IEA | PLAZA Homology | plant-type cell wall organization or biogenesis | HOM03D000073 |
GO:0071555 | IEA | PLAZA Homology | cell wall organization | HOM03D000073 |
GO:0045229 | IEA | PLAZA Homology | external encapsulating structure organization | HOM03D000073 |
GO:0071554 | IEA | PLAZA Homology | cell wall organization or biogenesis | HOM03D000073 |
GO:0071840 | IEA | PLAZA Homology | cellular component organization or biogenesis | HOM03D000073 |
GO:0016043 | IEA | PLAZA Homology | cellular component organization | HOM03D000073 |
GO:0009664 | IEA | PLAZA Homology | plant-type cell wall organization | HOM03D000073 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005576 | IEA | Genome Project | extracellular region |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
10.7 | cell wall.modification |
SignalP | Description |
---|---|
SignalP-noTM | Signal Peptide detected using noTM network |